Halomicrobium sp. LC1Hm: LC1Hm_0464
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Entry
LC1Hm_0464 CDS
T06261
Symbol
ffh
Name
(GenBank) Signal recognition particle GTPase
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall02024
Quorum sensing
hall03060
Protein export
hall03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LC1Hm_0464 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LC1Hm_0464 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC1Hm_0464 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hall02044
]
LC1Hm_0464 (ffh)
Enzymes [BR:
hall01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LC1Hm_0464 (ffh)
Secretion system [BR:
hall02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LC1Hm_0464 (ffh)
Eukaryotic Sec-SRP protein
LC1Hm_0464 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
ArsA_ATPase
AAA_22
cobW
SMC_N
ResIII
AAA_18
ATPase
AAA_24
CARD
RavZ_C
Motif
Other DBs
NCBI-ProteinID:
QGA81528
LinkDB
All DBs
Position
420701..422167
Genome browser
AA seq
488 aa
AA seq
DB search
MLWNCRGLVPADKGFNDGVAYLRQMVLDDLGSSLRGTLDDLRGKSRISEEDIEGIVKEIQ
RSLLQADVDVGLVQELSDNIETRALDEEPPAGTTPRDWVLRIVYEELVDLVGESTEIPLE
NQTIMLAGLYGSGKTTTAAKMAWWFSKKGLRPAIIQTDTDRPGAYDQAKQMADNAEVEFY
GDPDSNDPVEIAREGLAATEDADVRIVDTAGRDGLNEELIAQIERIEAEVEPDRNLLVID
AAMGQSAKDQAQEFEDAIGIDGVTITKLDGTAKGGGALAAVDQTDSTIAFLGTGETVKDI
ERFEPSGFISRLLGMGDLKQLTERVERAMEETGQEEGEWEPEDMMEGSFTLKDMRKQMEA
MNNMGPLDQVMDMIPGLGGGLMDQLPDDAMDVTQERMRDFEVIMDSMTEEELENPRVVGQ
SRTERIARGSGKPEERIRELLQQHKQMDQMLNQFQGMGEGDMERMMQQMQQQGGGMGGMG
GGGGPFGD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtggaactgccgagggctcgtcccagcagacaaaggctttaacgacggggtcgcg
tatctccgtcaaatggtactcgacgatctgggcagttccctgcgggggacgctcgacgat
ctccgtggcaagtcccgcatctccgaggaggacatcgagggcatcgtcaaggagatccag
cggtcgctgctgcaagcggacgtggacgtggggctggtccaggagctatcggacaacatc
gagacgcgggcgctggacgaggaaccgcccgccggcacgaccccgcgggactgggtcttg
cgcatcgtctacgaggagctggtcgatctggtcggcgaatccaccgagatcccactggag
aaccagacgatcatgctcgccggcctctacgggtcggggaagaccacgaccgcggcaaag
atggcgtggtggttctcgaagaaggggctccggccggcgatcatccagaccgacaccgac
cgtcccggcgcgtacgaccaggcaaagcagatggccgacaacgccgaggtcgagttctac
ggggacccggactcgaacgatcccgtcgagatcgctcgcgaggggctggcggcgacggag
gacgccgacgtgcgcatcgtcgacaccgccggtcgtgacggtctcaacgaggaactgatc
gcgcagatcgagcgcatcgaggccgaggtcgagcccgaccggaacctgctggtgatcgac
gccgcgatggggcagtccgcgaaggaccaggcccaggagttcgaggacgccatcggcatc
gacggcgtcacgatcacgaaactcgacgggacggcgaaaggtgggggcgcactggccgcg
gtcgaccagaccgactccaccatcgccttcctcgggaccggcgagaccgtcaaggacatc
gagcgcttcgagccgtcgggcttcatctcccgactgctcggcatgggcgacctgaagcag
ctcaccgagcgcgtcgagcgcgcgatggaggagaccggccaagaggagggcgagtgggag
cccgaggacatgatggagggctccttcacgctgaaggacatgcgcaagcagatggaggcg
atgaacaacatggggccgctggatcaggtgatggacatgatccccgggctgggcggcggg
ctcatggaccagctgccagacgacgccatggacgtgactcaggaacggatgcgggacttc
gaggtcatcatggactcgatgaccgaagaggaactggagaacccccgcgtcgtcggccag
tctcgcaccgagcgcatcgcccgcgggtcgggcaagcccgaggagcgcatccgcgagttg
ctccagcagcacaagcagatggaccagatgctcaaccagttccagggcatgggcgagggc
gacatggaacggatgatgcagcagatgcaacagcagggcggcggcatgggcgggatgggc
ggcggtggcggtcccttcggcgactga
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