Halomicrobium sp. LC1Hm: LC1Hm_0506
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Entry
LC1Hm_0506 CDS
T06261
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase, class I
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LC1Hm_0506 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hall01007
]
LC1Hm_0506 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hall03016
]
LC1Hm_0506 (lysS)
Enzymes [BR:
hall01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LC1Hm_0506 (lysS)
Amino acid related enzymes [BR:
hall01007
]
Aminoacyl-tRNA synthetase
Class I (A)
LC1Hm_0506 (lysS)
Transfer RNA biogenesis [BR:
hall03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LC1Hm_0506 (lysS)
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Gene cluster
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Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QGA81570
UniProt:
A0A5Q0UKA4
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Position
complement(461813..463627)
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AA seq
604 aa
AA seq
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MGSSMSESDPGDDSTRQTAARDPYALGDHDGEQGPEDRAVFWADAVADEIEAREPTEPVV
IKGAISPSGVPHLGNVNEIMRGYFVAESLRERGYEVQQVFTTDDRDPLRKLPRKLADLDG
NIVDLGEVNAGALGQNLGRPYTDVPDPFGCCDSYGEHFSNLIADCAELLGVDIEIVSTTD
LYEDGSFEELTRYVLDNQERARDVLGEYQDKVDADYVPFNPICGECGKVTETVTAVDTDA
GTVEYRCTDMEAGDRVIEGCGHEGSATLRDGKLPWRFEWPAGWDVLGVDFEPFGKDHAEG
SWPSGVDIAENVFEIAPPVPMVYEWFTLDGEPFSSSEGHVVMVHDVLELLEPAVVRYFFS
KDPSKARDFSIERLDQLVDDFDRTERLYFEDESGTDREEALGKRAYPPSVRPTVADRFDE
AFGDGTWRSMANDRDARETVADLLAEEYADRVRIPYTFAAVLGMFDDPELRTDVARKEGH
LADDTPEWAVETAMERVDLASEWARRTDNEFNYELKRAELPETDFDAATETALDELADFV
AEGHDGETIQGEIYETAKRHDVPISDFFGAGYRLLFDESEGPQLGPFVAKLDREFVVERF
RRNR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgggatcgagcatgagcgagagcgatccaggggacgacagcacacggcagacggcagcc
cgagacccgtacgcgctgggcgatcacgacggcgaacagggtcccgaggaccgggcggtg
ttctgggcggacgcggtcgccgacgagatcgaggccagagagcccaccgagccagtcgtc
atcaagggcgcgatctcgccctcgggcgtcccccaccttggcaacgtcaacgagatcatg
cggggctacttcgtcgccgaatccctgcgagagcgcgggtacgaggtccagcaggtgttt
accaccgacgaccgggatccgctccggaagctcccccgcaagctcgccgatctcgacggc
aacatcgtcgatctgggagaagtcaacgccggtgcgctcggccagaacctcgggcgtccc
tacacggacgtaccggaccccttcggctgctgtgactcctacggcgaacacttctcgaac
ctgatcgccgactgtgcggagctgctcggcgtcgacatcgagatcgtctcgacgacggac
ctctacgaagacggttccttcgaggaactgacgcgctacgtcctcgacaatcaagagcgg
gcacgggacgtactgggcgagtaccaggacaaggtcgacgcggactacgtcccgttcaac
ccgatctgcggagagtgtggcaaggtcaccgagaccgtcacggccgtggatacggacgcc
ggtaccgtcgagtaccgctgtacggacatggaggccggcgaccgcgtcatcgaggggtgt
ggccacgaaggaagcgcgacgctgcgggacggcaaactgccctggcgcttcgagtggccg
gcgggctgggacgtgctcggcgtcgacttcgagccgttcgggaaggaccacgccgagggg
tcctggccctccggggtcgacatcgcggagaacgtcttcgagatcgcgccgccggtgccg
atggtctacgagtggttcacgctcgacggcgagccgttctcctcttccgagggccacgtc
gtgatggtccacgacgtactggagctgctggagccggcggtcgtccggtacttcttctcg
aaagatcccagcaaggcacgggacttcagcatcgagcgcctcgaccagctggtcgacgac
ttcgaccggaccgagcgcctctacttcgaggacgagagcggcaccgaccgagaggaggca
ctcggaaagcgggcctatccgccgtcggtcaggccgaccgtcgccgaccgcttcgacgag
gcgttcggcgacggcacctggcgcagcatggccaacgaccgcgacgcccgcgagaccgtc
gcggacctgctcgccgaggagtacgccgaccgcgtccgcatcccctacaccttcgccgcg
gtgctcgggatgttcgacgatcccgagttgcggacggacgtggctcgcaaggagggacat
ctcgccgacgacacccccgagtgggccgtcgagaccgcgatggagcgggtcgatctggcc
agcgagtgggcccgccggacggacaacgagttcaactacgagctcaagcgcgccgagctg
cccgagaccgacttcgacgcagccaccgagaccgcactggacgagctggccgacttcgtc
gccgagggccacgacggcgagacgatccagggcgagatctacgagaccgcaaagcgccac
gacgtgcccattagcgacttcttcggggccggctaccggctcctgttcgacgaatcggag
gggccacagctcggtcccttcgtcgcgaagctcgaccgggagttcgtcgtcgaacggttc
cgccggaatcggtag
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