Halomicrobium sp. LC1Hm: LC1Hm_0519
Help
Entry
LC1Hm_0519 CDS
T06261
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hall03016
]
LC1Hm_0519 (truA)
Enzymes [BR:
hall01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LC1Hm_0519 (truA)
Transfer RNA biogenesis [BR:
hall03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LC1Hm_0519 (truA)
Prokaryotic type
LC1Hm_0519 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QGA81583
UniProt:
A0A5Q0UIT5
LinkDB
All DBs
Position
473015..473806
Genome browser
AA seq
263 aa
AA seq
DB search
MRAYRIAYDGQPYHGFQRQPDVETIEGELLAALDRLGVTDGGVPAGYAAAGRTDAGVSAL
AQTVAFEAPAWLSPAAFNSELPAAVRAWASADVPEDFHATHDAREREYVYHLYAPERHDD
RARRAADALAGEHDFHNLTPDDRGTVRALSIDLTREAAFLVCRLRAGGFCRQLVRRVVGL
VDEIRRGEAPVSKVDRVLDSEPIDGAAGVGPAPPTPLVLTGVDYDLAFSVDDAACESAQS
VFADRVAERRAGARVAEEIRDGV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctatcggatcgcctacgacggccagccctaccacgggttccagcgtcagccc
gacgtcgagacgatcgagggggagctactggccgcactcgaccgactcggggtcactgac
gggggcgttccggcgggctacgccgcggccggacggacggacgctggggtctcggcgctg
gcccagacggtcgccttcgaggccccggcgtggctctccccggcggcgttcaacagcgaa
ctcccggccgcggttcgtgcgtgggcgagcgccgacgtgcccgaagactttcacgcgacc
cacgacgcccgagagcgcgagtacgtctatcacctgtacgcgcccgagcgccacgacgac
cgggctcggcgggccgcggacgccctcgccggtgagcacgacttccacaatctcacgccg
gacgaccgtgggacggtcagagcgctctcgatcgatctcacccgggaggcggcgtttctc
gtctgccggctccgtgccggtgggttctgtcgccaactcgtccgccgggtcgtcggtctc
gtcgacgagatccgccggggcgaggctccggtgtcgaaggtcgatcgcgtgctcgactcg
gagccgatcgacggggctgcgggtgtcggacccgcgccgccgacgccgctggtcctcacc
ggcgtcgactacgacctcgcgttttccgtcgacgacgctgcctgcgagagtgcccagtcg
gtctttgccgaccgcgtcgccgaacgccgcgccggtgcccgcgtcgccgaggagatccgc
gacggcgtgtga
DBGET
integrated database retrieval system
