KEGG   Halomicrobium sp. LC1Hm: LC1Hm_0521
Entry
LC1Hm_0521        CDS       T06261                                 
Symbol
rpt1
Name
(GenBank) ATP-dependent 26S proteasome regulatory subunit
  KO
K03420  proteasome regulatory subunit
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03050  Proteasome
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    LC1Hm_0521 (rpt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:hall03051]
    LC1Hm_0521 (rpt1)
Proteasome [BR:hall03051]
 Prokaryotic proteasome
  Archaeal regulatory particles
   LC1Hm_0521 (rpt1)
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_2 AAA_16 AAA_22 Prot_ATP_ID_OB_C AAA_lid_PRS2_C nSTAND3 TIP49 NPHP3_N Sec3_CC AAA_14 AAA_28 DUF815 Rootletin AAA_17 Mg_chelatase DUF4757 AAA_33 AAA_11 nSTAND_NTPase5 NACHT Sigma54_activat COG6_N NTPase_1 NB-ARC TsaE AAA_18 AAA_7 IstB_IS21 AAA_3 RNA_helicase PhyR_sigma2 Prot_ATP_ID_OB_N CCDC138_cc Macoilin ABC_tran Parvo_NS1 DUF730 AAA_30 Torsin DUF4438 CPT Rv0250c DUF8221 AAA_24 CENP-Q
Other DBs
NCBI-ProteinID: QGA81585
LinkDB
Position
475772..476992
AA seq 406 aa
MSRSPSLPDRPRLDLDPDMTPEERLEALRDHFEQIVEVNDELESQLDAAKDRRRSLTEDV
DRIERENEMLKTSSLYIATAEEVTDDGVIVKQHGNNQEVLTEVSPSMRERLEAGDRVAIN
DSFSVKEILEGEKDARAQAMEVDGSPDVTYGDIGGLEAQVREVREAVEEPLVNAEQFREV
GIEPPSGVLLHGPPGTGKTMLAKAVANETDATFIKMAGSELVRKFIGEGARLVRDLFELA
ADREPAVIFIDEIDAIAAKRTESKTSGDAEVQRTMMQLLSEMDGFDERGEIRIIAATNRF
DMLDRAILRPGRFDRLIEVPNPDFDGRTRILEIHTEEMELADTVELSSIAGKTDGLSGAE
LASLATEAGMFAIRDQRTTVTEADFDDALEKIEDGTEGGSVPVAFA
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgtcgcgcagtccttcgcttcccgatcggccccggctggatctcgatcccgacatgacc
cccgaggagcgcctcgaagcgctgcgggatcacttcgaacagatcgtggaagtcaacgac
gaactggaatcgcaactcgacgcggccaaagaccgtcggcgctcgctgacggaggacgtc
gaccgcatcgaacgggaaaacgagatgctgaagacctcgtcgctgtacatcgcgacggca
gaggaggtcaccgacgacggcgtgatcgtcaagcaacacggcaacaaccaggaggtgctg
accgaggtctcgccgtcgatgcgggaacggctcgaagccggcgatcgggtcgcgatcaac
gactcgttcagcgtcaaggagatcctcgaaggcgagaaagacgctcgcgcacaggcgatg
gaggtcgacggctcccccgacgtgacctacggcgacatcggcgggctcgaagcgcaggtc
cgcgaagttcgggaggccgtcgaggagccgctggtcaacgccgagcagttccgcgaggtc
ggcatcgaaccgccgtcgggcgtcctcctgcacggtccgcccggcacggggaagacgatg
ctggccaaagccgtcgccaacgagaccgacgccacgttcatcaagatggccggctccgag
ctggtccggaagttcatcggcgagggcgcgcgactcgtccgtgacctgttcgagctggcg
gccgaccgcgaacccgccgtcatcttcatcgacgagatcgacgccatcgcggccaagcgg
accgaatcgaagacctccggcgacgccgaggtccagcggacgatgatgcagctgctcagc
gagatggatggcttcgacgaacgcggcgagatccggatcatcgccgccaccaaccgcttc
gacatgctcgaccgcgcgatcctccggcccggccgcttcgaccgcctcatcgaggtcccc
aacccggacttcgacgggcggacgcgcattctggagatccacaccgaggagatggagctg
gccgacacggtcgagctgtcgtcgatcgccggcaagaccgacggcctctcgggtgccgag
ctggcgtcgctggccaccgaggccggcatgttcgcgatccgcgaccagcgcacgaccgtc
accgaggcggacttcgacgacgctctcgaaaagatcgaggacggcaccgagggcggcagc
gttcccgtcgccttcgcctga

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