Halomicrobium sp. LC1Hm: LC1Hm_0532
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Entry
LC1Hm_0532 CDS
T06261
Symbol
infB
Name
(GenBank) Translation initiation factor 2 (IF-2; GTPase)
KO
K03243
translation initiation factor 5B
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hall03012
]
LC1Hm_0532 (infB)
Translation factors [BR:
hall03012
]
Eukaryotic type
Initiation factors
eIF-5
LC1Hm_0532 (infB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D4
IF-2
GTP_EFTU_D2
MMR_HSR1
Dynamin_N
ATP_bind_1
Roc
Motif
Other DBs
NCBI-ProteinID:
QGA81596
UniProt:
A0A5Q0UJ51
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Position
complement(484443..486257)
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AA seq
604 aa
AA seq
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MSEPDSHADDDADAGGLRTPIVAVLGHVDHGKTSLLDKIRGSAVTAGESGAITQHIGSTA
VPLDVISSMAGDLVDPTDFDLPGLLFIDTPGHHSFSTLRSRGGALADIAILVVDVNDGFQ
PQTMEAIDILKRTQTPFIVAANKIDTVPGWNPNEGEPVRVSKEKQSDRVQGDLDEKLYEI
IGQLSDNGFSADMYWRVQDFQNNIGVVPVSAETGEGVPDLLTVMMGLSQRYLKEEMSIDV
GGPGVGTVLEVTDARGFGTTVDAVVYDGTISEDDEIVVGGLDGPIVTEVRALLKPQPLAE
IRTEKQFERVESVAAADGVKIAAPDLDDAMAGAPVRVVRDRDVDEVILEVEEELAGFEVS
TAEEGVVIKADTLGSLEALSGTLEEHEIPVMRAEVGDVAPRDIRVAETAGEPINRAVLAF
GVDTLDDAERLADQEDVEIFADDVIYQLIESYEDHVEAIETAQQDQILDNITRPARFQIL
QDHTFRQSDPAVVGVEILAGRIKRNSNVALFDGDEPERVGHLKSIQDEGEDVDEANRGDR
VAVSIDGPTVGRQIEEGDELWTELPEKHAKILEQELKEDITGDEREALNQYLEKQRNRDP
FWGK
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccgattctcacgctgacgacgacgccgacgctggtggccttcgaaccccg
atcgtggcggtgctcggccacgtcgaccacggcaagacgagcctcctggacaagatccgt
ggctcggcggtgaccgcgggcgagtccggcgcgatcacccagcacatcggctcgacggcc
gtgccgctggacgtgatctcgtcgatggccggcgacctcgtcgatccgaccgacttcgac
ctccccggcttgctgtttatcgacacgccgggccaccactcgttctcgacgctgcgatcg
cgcggcggcgcgctggccgacatcgcgatcctcgtcgtcgacgtcaacgacggcttccag
ccccagacgatggaggccatcgacatcctcaagcggacccagacgccgtttatcgtcgcc
gcaaacaagatcgacaccgtccccggctggaaccccaacgagggcgagccggtccgggtg
agcaaggagaaacagtccgaccgcgtccagggcgacctcgacgagaagctgtacgagatc
atcggccagctctctgacaacggcttctcggccgacatgtactggcgcgtccaggacttc
cagaacaacatcggcgtcgtccccgtctcggccgagaccggcgagggcgtgcccgacctg
ctgacggtgatgatggggctgtcacagcgatacctcaaagaggagatgtccatcgacgtg
ggcgggcccggcgtcgggaccgtcctcgaagtgaccgacgcccgcgggttcgggacgacc
gtcgacgccgtcgtctacgacgggaccatcagcgaggacgacgagatcgtcgtcggcggc
ctcgacggcccgatcgtcacggaggtccgagcgttgctgaagccccagccgctggcagag
atccgtaccgagaagcagttcgagcgcgtcgagtcggtcgccgcggcagacggggtgaaa
atcgccgcaccggacctcgacgacgcgatggccggagcaccggtccgggtcgtccgcgac
cgcgacgtcgacgaggtcatcctcgaagtcgaggaggagttggccggcttcgaggtctcg
acagccgaggagggcgtcgtcatcaaagccgacacgctcggctcgctggaagcgctctcc
gggacgctcgaagaacacgagattcccgtgatgcgcgccgaggtcggcgacgtggctcca
cgggacattcgggtcgccgagaccgcgggcgaaccgatcaaccgggccgtcctggctttc
ggggtcgacacgctcgacgacgccgaacggctggccgaccaggaggacgtggaaatcttc
gccgacgacgtgatctatcagctgatcgagagctacgaggaccacgtcgaggccatcgag
accgcccagcaagaccagatcctcgacaacatcacccgccccgctcgcttccagatcctc
caggatcacaccttccgccagtctgaccccgccgtcgtcggcgtcgagatcctcgccgga
cggatcaagcgaaacagcaacgtcgcgctgttcgacggcgacgagcccgaacgcgtcggc
cacctcaagtccatccaggacgagggcgaggatgtcgacgaagcgaatcgcggcgaccgc
gtggccgtctccatcgacggaccgaccgtcggccgccagatcgaggagggcgacgagctg
tggaccgaactgcccgagaaacacgccaagatcctcgaacaggaactcaaagaggacatc
accggcgacgaacgcgaggcgctcaatcagtacctcgaaaagcagcgcaaccgcgacccc
ttctgggggaagtga
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