Halomicrobium sp. LC1Hm: LC1Hm_0746
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Entry
LC1Hm_0746 CDS
T06261
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_0746
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_0746
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7436
TrmB
E2F_TDP
MLD
PadR
PLDc_2
DprA_WH
Val_tRNA-synt_C
DUF6730
IcmF-related_N
Holin_BhlA
DUF7432
Motif
Other DBs
NCBI-ProteinID:
QGA81809
UniProt:
A0A5Q0ULX1
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Position
complement(684212..685015)
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AA seq
267 aa
AA seq
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MANLRDLGLSEYEDRAFRSLLDTGPTTAKELSRASDVPMGRIYDVLNSLETYNLVRSQTA
SRPKKYAPVEPDTALERLLEDKKRQLDEKAKQYEEIVDELSNQLESAEPVEEPFWTAAVG
PAETVDLLVERLSAADERIVMVGSLPGQQLDLTEATDRLVDELESALQRGVEVYMLLPPS
FVEAVPADVGEAYQRRLQQYDNYHYRTTEEVTSTFELIDDVEVCIEVPHPLGGSTFAVID
LKDPEFADEIYAEFEPRWQRAREIVGD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgagagatctcggcctctccgagtacgaagatcgcgccttccggtcgctg
ctggacacgggaccgacaaccgcgaaggagttgtcacgcgccagcgacgttccgatgggc
cgcatctacgacgtgctcaacagcctggagacgtacaacctcgtccgcagccagacggcc
agtcgccccaaaaagtacgcgccggtcgagcccgacaccgccctggagcggctcctggag
gacaagaaacgccagctcgacgagaaggcaaagcagtacgaggagatcgtcgacgagctc
tcgaatcaactcgaatccgccgagccggtcgaggaaccgttctggaccgccgcggtggga
cctgccgagaccgtcgacctcctggtcgaacggctctcggccgcggacgagcgaatcgtg
atggtgggctcgctgcccggccagcaactcgacctgaccgaggcgaccgaccggctggtc
gacgaactggagagtgccctccagcgcggcgtcgaggtgtacatgctcttgccgccctcg
ttcgtcgaggcagtgccggcagacgttggcgaggcctaccagcgacgcctccagcagtac
gacaactaccactaccgcaccacggaggaggtcacgtcgacgttcgaactgatcgacgac
gtcgaggtctgtatcgaggttccccacccgctcggagggtcgacgttcgccgtcatcgac
ctgaaagatccggagttcgcggacgagatctacgcggagttcgagccacgctggcagcgg
gcccgagagatcgtcggcgactga
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