KEGG   Halomicrobium sp. LC1Hm: LC1Hm_0792
Entry
LC1Hm_0792        CDS       T06261                                 
Symbol
miaB
Name
(GenBank) MiaB-like tRNA modifying enzyme
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
hall  Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:hall00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hall03016]
    LC1Hm_0792 (miaB)
Enzymes [BR:hall01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     LC1Hm_0792 (miaB)
Transfer RNA biogenesis [BR:hall03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    LC1Hm_0792 (miaB)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM SPL
Other DBs
NCBI-ProteinID: QGA81854
UniProt: A0A5Q0UK01
LinkDB
Position
728537..729799
AA seq 420 aa
MAQYHIETYGCTSNRGETQEIEQALREGGHYPAEGPEEADVAILNTCTVLEKTERNMLRR
AEELDAETPGDLVVTGCMALAQGEEFRAADVDAEVLHWDDVPQHVLNGECPTVTPDTETV
LDGVVGILPIARGCMSDCSYCITKQATGRIESPSVEENVEKARALVHAGAKEIRITGQDT
GVYGWDTNQGESLLPELLERICTEIDGDFRVRVGMANPKGVHGVREELARVFAEHDELYN
FLHAPVQSGSDDVLADMRRQHAVGEYVEVVDTFDEHLDYWTLSTDFIVGFPSETESDFQQ
SMALLRETRPEKINVTRFSKRPGTDAAEMKGLGGQTKKDRSKAMSELKMDVTGDAYEEMV
GEERRVLLTEDGTDESLVGYDEAYRQVVVVDARDRGLKVGDFVDCEITSHNTVYAFGEPI
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggcccagtatcacatcgagacgtacgggtgtacgtcgaaccgcggcgagacccaggag
atcgagcaggccctccgagagggtggccactaccccgccgagggacccgaggaggccgac
gtggcgatcctcaacacctgtaccgtcctcgaaaagaccgagcggaacatgcttcgacgg
gccgaggaactcgacgccgagacccccggcgacctggtcgtcaccggctgtatggcgctg
gcacagggcgaggagttccgcgcggccgacgtggacgccgaggtcctccactgggacgac
gtgccccagcacgtcctcaacggcgagtgcccgacggtcacgcccgacacggagaccgtc
ctcgacggcgtcgtcggcatcctgccgatcgcgcgtggctgtatgtcagactgttcgtac
tgtatcaccaagcaggcgaccggccgaatcgagtccccgtcggtcgaggaaaacgtcgag
aaggcccgagcgctggtgcatgccggtgcgaaggagatccgcatcacgggccaggacacc
ggcgtctacggctgggacacgaaccagggcgagagcctgctgcccgagcttttggagcgg
atctgcaccgagatcgacggcgacttccgggtccgcgtggggatggctaacccgaagggg
gtccacggcgtccgcgaggagctggcccgcgtcttcgccgaacacgacgagctgtacaac
ttcttgcacgcgcccgtccagagcgggagcgacgacgtgctcgcggacatgcgccgccag
cacgccgtgggcgagtacgtcgaggtcgtcgacaccttcgacgagcacctggactactgg
acgctgtcgacggacttcatcgtcggcttccccagcgagaccgagtcggacttccagcag
tcgatggcgctgctgcgcgagacccgcccggagaagatcaacgtcacgcgcttctcgaag
cgtcccggcaccgacgccgccgagatgaagggcctcggcggccagacgaagaaggatcga
tcgaaggccatgtccgagctgaagatggacgtgaccggcgacgcctacgaggagatggtc
ggcgaggagcgacgcgtcctcctgaccgaagacgggaccgacgagtcgctggtgggctac
gacgaggcgtaccgacaggtcgtcgtcgtcgacgcccgagaccgtggcctcaaggtcggc
gacttcgtcgactgtgaaatcaccagccacaacaccgtctacgccttcggcgagccgatc
tag

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