Halomicrobium sp. LC1Hm: LC1Hm_0794
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Entry
LC1Hm_0794 CDS
T06261
Symbol
salY
Name
(GenBank) ABC-type antimicrobial peptide transport system, permease component
KO
K02004
putative ABC transport system permease protein
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hall02000
]
LC1Hm_0794 (salY)
Transporters [BR:
hall02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
LC1Hm_0794 (salY)
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Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
DUF6406
CDC48_N
Motif
Other DBs
NCBI-ProteinID:
QGA81856
UniProt:
A0A5Q0UJW0
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All DBs
Position
complement(730569..731708)
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AA seq
379 aa
AA seq
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MIDSPLARFSPFLAFARNNLSRARARTILAMAGITIGVVAIASLGMFGATLEQSFMGTAD
DAIRTVGVGPGEDSEFGLLRREQVAEIERYAGNGDVYTLSRGRARVTGLQQTTSASLVSV
SDPEVFVTAESGQIPRNWRSGVAIGNELAETLGVQPGDSVQVNGESRRVVAVLAESSRAS
FVSTGDAVVLPPGELGDGASQVLIRAETPQQAFAISDRIDENLNSERRSRYSVFDAESAL
ERFNQQIGLIRTFLLAVGGISLLVASVSILNVMLMSTIERKEEIGVLRAVGYHRLDIVKL
MLYEAALLGVVGSIFGVFISIGLGMVMNAQLLSDPLAFSGQALQYTVLGFLFGTGASFLS
GLYPAWKAANARPVEALRD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgattgacagcccgctcgcgcggttctcgccgttcctggccttcgctcggaacaacctc
tcgcgggcacgcgctcggacgatcctcgcgatggcggggatcactatcggcgtggtcgcg
atcgcctcgctggggatgttcggtgccacgctcgaacagtcgttcatggggacggccgac
gacgcgatccgaaccgtcggcgtcggccccggcgaagactcggagttcgggttgctccgt
cgagaacaggtcgccgagatcgaacgctacgccggcaacggcgatgtctacacgctttcc
cgtggacgggcgagagtgaccgggttacagcagacgacgagcgcgtcgctggtgtcggtc
tccgatccagaggtgttcgtcaccgcggaatcgggccagatcccgcggaactggcgttcg
ggtgtcgcgatcgggaacgaactggcagagacgctcggagtccaacccggagacagcgtg
caggtcaacggcgagagccgtcgggtcgtcgccgtgctggccgagtcaagtcgcgcctcg
ttcgtctcgacgggcgatgccgtcgtcctgccaccgggtgaactcggtgacggcgcgtca
caggttctcattcgcgcggagacgccccagcaagcgttcgccatcagcgatcggatcgac
gagaatctcaacagtgagcggcgctcgcgatacagcgtcttcgacgccgagtcggccctc
gaacggttcaaccagcagatcggcctcatccggacgttcctgctcgcggtcggggggatc
tcgctgctggtcgcgtccgtgagcattctcaacgtgatgctcatgagcacgatcgagcgc
aaagaggagatcggcgtcctccgggcggtcggctatcaccgcctcgacatcgtcaagctg
atgctgtacgaagcggcgttgctgggcgtcgtcggctccatcttcggcgtgttcatcagt
atcggcctgggcatggtgatgaacgcacagttgctctcggaccccctcgccttctctggg
caagccctgcagtacacggtgcttggcttcctcttcgggacgggtgccagcttcctcagc
ggcctctatccggcctggaaggcggccaacgcccggccggtcgaggcactccgggactga
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