Halomicrobium sp. LC1Hm: LC1Hm_0888
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Entry
LC1Hm_0888 CDS
T06261
Name
(GenBank) Transposable element, IS605 OrfB family
KO
K07496
putative transposase
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC1Hm_0888
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
Phytase-like
IBR
Motif
Other DBs
NCBI-ProteinID:
QGA81950
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Position
827782..828999
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AA seq
405 aa
AA seq
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MKLAVSDEQRDALHRTADQYLDCANRTADYCWSSTSYTECKTNKRQVRDALYSKLRGETD
LQAQLVQAAIKRAVEAVKACVERWKKGQRVSCPTFTAETLDYDTRSATFYRNKVSLATVE
GRVEPSFVLPADSPTPYERYVLSEDHEFRESTLRYDTATDEFYLNISTRRIDSDDEVSED
TEHQTVLGIDLGVNSLAVSSTGTFWQGDEYDHWCREFEKRRGEMQQRGTQAAHNALLRLG
KREEAWRKQYIHIVANEIVSEAVENGCDVIVFEDLTDIRKRLPQAKWHHIWAFRRLSEYV
DYKAPEQGVSVEQVEPNHTSQRCSRTDCGFTHDDNRHGEHFECQKCGYEVNADYNGAKNI
GLRYARKRKHRLRSSPKSGSGDAPVDVRVNGGTLNGESHRPIAGD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcgctgtttccgacgagcaacgcgacgcactccaccgaaccgctgaccaatac
ctcgactgcgcaaatcgaaccgcagactactgctggtccagcacctcctacaccgagtgc
aagaccaacaaacggcaggttcgagacgcgctctactccaaacttcgaggggagacggat
ctacaggcacaactcgttcaagccgccatcaaacgcgccgtcgaagccgtcaaagcgtgt
gtcgaacgctggaagaagggacagcgcgtctcttgccccacgttcaccgctgaaacgctg
gactacgacacgcggagcgcgaccttctaccgcaacaaggtgtcgctagcaactgtcgaa
gggagggtcgaaccctcgtttgttctcccggcggacagtccgacgccctacgagcggtac
gtactctcagaggaccacgagttccgcgaaagtacgcttcggtacgacacggcaaccgac
gagttctacctcaacatctcgacgcggcggattgacagcgacgacgaggtttcggaagat
actgagcaccaaacggtcctcggtatcgacctcggcgtcaacagtctcgcggtgtcttcg
accggcacgttctggcaaggtgacgagtatgaccactggtgccgcgagttcgagaagcgg
cgtggtgagatgcaacagcgcggcacgcaagccgcgcacaatgccctgcttcgcctcggc
aagcgcgaggaagcctggcggaaacagtacatccacatcgtcgcaaacgagatcgtttcg
gaagccgtcgagaacggatgcgacgtgatcgtgttcgaagatctaacggacatccgcaag
cggcttccgcaggcgaagtggcaccacatctgggcgttccgacgcctttccgagtacgtc
gattacaaagctcccgaacagggcgtctccgtggagcaagtcgagccgaaccacacgtcc
caacgctgttctcggacggactgtgggttcacgcacgacgataaccgccacggcgaacac
ttcgagtgccagaaatgcggctacgaggtgaacgcggactacaacggcgcgaagaatatc
gggctacggtatgctcgaaaacgaaaacacagactccggtcctcgcccaagtcggggagc
ggagacgcaccagtagacgtgcgtgtgaatggtgggacgttgaacggcgagagtcaccgg
cctattgctggcgactga
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