Halomicrobium sp. LC1Hm: LC1Hm_0915
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Entry
LC1Hm_0915 CDS
T06261
Name
(GenBank) Transposable element, IS605 OrfB family
KO
K07496
putative transposase
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC1Hm_0915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
C1_2
GvpH
Ribosomal_L37ae
Motif
Other DBs
NCBI-ProteinID:
QGA81977
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Position
856738..858012
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AA seq
424 aa
AA seq
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MAKQVVTRTYTASIRNQQRVSDDLDSLGFAASKLWNVGRWVCDRVWSEIGHIPSHNELTT
YLKSHERYDDLHSQSSQRVLQELAEAFNGWYGKRRNGDTRANPPKYRKHGDDHPRSTVTF
KAAGFKLDTNYERVRLSKGSNLKAYWSDFILCEYQTRPDVDLSTVETVQQVRAVWTGDEW
ELHFVCKVEIEVSEAPGEKTVGVDLGINNFAALAYEDGHSELYPLNCLKQDDYYFSKRLA
QCDDSNSEQATRLNQKNSARRTHYFHTLSKHIVQRCVDEGVGTIVVGDLSGIREDEENSE
SKNWGNHGNLDLHSWAFDRFTSMLAYKAEMDGITVKQVSERDTSKSCSCCGRKRKANRVE
RGLYVCDECETVANADVNGAENIRQKVSPNPHGEDRSNGWLAQPSTFLFDKETGAFAPQE
QITS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaggtcgttacccgcacctacactgcttccattaggaaccagcagcgggtg
tctgacgaccttgattcgctcgggttcgcagcctcgaaactctggaacgtcggacggtgg
gtctgcgaccgagtgtggtctgaaatcggccacattcccagtcacaacgaactcaccacc
tacctgaagtcgcacgaacgctacgatgacctgcattctcagtcaagtcagcgagtcctt
caagaactcgctgaagcgttcaacggctggtacggcaaacgacgcaacggagacacgaga
gccaacccgccgaagtaccgcaaacacggcgacgaccacccccgaagcacggtcacgttc
aaagccgctggcttcaaactcgacaccaactacgagcgagtccgcctcagcaaaggctcg
aacctcaaagcatactggtcggatttcatcctctgcgaataccagactcgtcccgacgtt
gacctctccaccgtcgagaccgtgcaacaggttcgggctgtctggaccggcgacgagtgg
gaactccacttcgtctgcaaagtcgagatcgaggtttctgaagcacccggtgagaagacc
gtgggtgttgacctcggcatcaacaacttcgccgcactcgcctacgaagacggtcacagc
gaactgtacccgctcaactgcttgaagcaggacgactactacttcagcaagcgactcgcc
caatgtgacgattctaactccgagcaagctacgcggttgaaccagaagaactcggctcgt
cgcactcactacttccacacgctctcgaaacacatcgttcagcgatgtgtggacgaaggt
gttggtacgatcgtggttggcgacctctccggcatccgcgaggacgaggagaacagcgag
tcgaagaactgggggaatcacggcaatctcgacctgcattcgtgggcgttcgaccgcttc
acttcgatgcttgcgtacaaagccgagatggacggcatcacggtcaagcaagtgtctgag
cgggatacgtcgaagtcgtgttcgtgttgtggtcggaagcggaaggcgaaccgcgtggag
cgtgggttgtacgtctgtgatgagtgtgagacggtggcgaacgcggatgtgaacggtgct
gagaacatccggcagaaagtatctccgaatcctcacggagaggataggagtaacggctgg
ttggcacagccatcgacgttcttgtttgacaaggaaactggtgcgttcgcacctcaagaa
cagatcacgtcgtaa
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