KEGG   Halomicrobium sp. LC1Hm: LC1Hm_0989
Entry
LC1Hm_0989        CDS       T06261                                 
Symbol
truB
Name
(GenBank) Pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
hall  Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:hall00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hall03016]
    LC1Hm_0989 (truB)
Enzymes [BR:hall01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LC1Hm_0989 (truB)
Transfer RNA biogenesis [BR:hall03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LC1Hm_0989 (truB)
 Prokaryotic type
    LC1Hm_0989 (truB)
SSDB
Motif
Pfam: TruB_C_2 TruB_N PUA DKCLD Pus10_C
Other DBs
NCBI-ProteinID: QGA82049
UniProt: A0A5Q0UMK5
LinkDB
Position
complement(911883..912782)
AA seq 299 aa
MVRDAPEHRSPADLLTFGVVNLDKPPGPSAHQVAAWVRDAVDDALDAAGDDRTLGRVAHG
GTLDPKVTGCLPILLGDAARAARVFDDAVKEYVTILELHDQAPPDFDSIVAEFEGEIYQK
PPRKSAVKRRLRSRTIHALDVLERHDRRALLRVRCDSGTYVRKLCHDIGLALGTGAHMGE
LRRTATGDFDDRDLVTMEDLVDALAEWADNDDESWLHETVAPAERALRGYPTVTIAPSAA
REVAHGAPVYAPGVIETDAEQGAEVCCVTPDGAAVCLGRLVGGPDAEGGVAVELERVLV
NT seq 900 nt   +upstreamnt  +downstreamnt
atggtccgcgacgcgcccgaacaccggtcgcccgccgatctgctcaccttcggcgtcgtc
aacctcgacaagccacccggcccctccgcccaccaggtggccgcctgggtccgggacgcc
gtcgacgacgcgctcgacgcggccggcgacgaccggacgctcgggcgcgtcgcacacggc
ggcacgctcgacccgaaagtcacgggctgtctcccgatcctgctcggcgacgccgcccgc
gcggcacgcgtgttcgacgacgcggtcaaagagtacgtcacgatcctcgaactccacgac
caggcaccgccggatttcgactccatcgtcgccgagttcgagggcgagatctaccagaag
cccccgcgcaagagcgccgtgaaacgacggctccgcagccggacgatccacgcgctggac
gtcctcgaacgccacgaccgccgggcgctcctgcgcgtccgctgtgactctggcacgtac
gtccgcaagctctgtcacgacatcgggctcgcgctcgggaccggcgcacacatgggcgaa
ctccgacgcaccgcgaccggcgatttcgacgatcgcgacctcgtgactatggaggacctc
gtcgacgcgctggccgagtgggccgacaacgacgacgagagctggctccacgagacggtc
gcacccgccgagcgcgcactccgtggctacccgacggtcacgatcgcccccagcgccgcc
cgcgaggtagcacacggcgcaccggtctacgcgcccggcgtcatcgagaccgacgccgag
cagggtgccgaggtgtgctgcgtgacgcccgacggcgcggcggtgtgtctgggccgactg
gtcggcggccccgacgccgagggcggcgtcgccgtcgaactcgaacgcgtcctcgtctaa

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