Halomicrobium sp. LC1Hm: LC1Hm_1022
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Entry
LC1Hm_1022 CDS
T06261
Name
(GenBank) Secreted protein, with PKD repeat domain
Organism
hall
Halomicrobium sp. LC1Hm
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K319L-like_PKD
Big_9
PKD_4
Sde0182_C
PKD
PEGA
Y_Y_Y
He_PIG
Cadherin_5
Cadherin_4
CarbopepD_reg_2
Ig_3
ChitinaseA_N
Motif
Other DBs
NCBI-ProteinID:
QGA82082
UniProt:
A0A5Q0UK08
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Position
944348..946723
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AA seq
791 aa
AA seq
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MGATFILAMMVMTAPVAAATTLFSTGFESGFPSEFTHTEPESDRNFSVQSNTVISGSNTL
EFSNPDSGFENDGFHYSLSSPTDSIDISQKYQTTGDTEFIVNLYDDSGSSFTHKVKFDTE
TDEIVVENNSGTTLGSTSYSFQNGTTYDLNVVYESGDIVANVDGTQEVSTGVVSYSGIEE
VGYTHNTVNQGTNSYLDDMSVSTVGSTTSTGDIEVSVSDAGGSGSPVADTTVDLEDSGGT
VVATKTVSSSDADNKVTFSGYTAGETYTVRASHPDYDNASKTVTNTENTTDSVSFDMART
MGTIEVSEVTDTSATAIDYPNIDVYRANDGSSVTSIDGAILPYTADVWIAYDYDVTVDGY
NEGVYHPKTKTYTVSDGSTTSKSYTLAEMPNADFQDSDNASTVEEGTSVTIDASASSDPE
GDTLTYSWDTNNDGTFGDESGGSSITVSESSAGTYEYTVKVSDNNGGTDTATYTLTVEEP
NSAPTADFQDSDNAETITVDGSLTLDASASSDPDGDSLTYSWDTNNDGTYGDESGGSSIS
VSESSSGTYNYSVKVSDGNGSTDTATFTLTVEEPATGTLEITGVTDSDGNSLSSFDYTIT
RVSDGTQVASGTGASAPVSNTLATGDYDVTVNKDMYNSQNLTLTVTENSTTSQSFTIDKK
MKSFNIVVEDVDGNQLDSFDYTVSEDGTDIVAGTSSYGNDVKLADIEYGTYTFEVTSDGY
ESASKSATVDDQKDQVVFTLSESTSSDDTSDGSGGGGSGSNTTNNHLLVIGVFVLVFLII
LLFLAIRNREE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaactttcattctcgccatgatggtgatgactgctcccgttgctgctgcgact
acactatttagtacaggcttcgaatcaggattcccttcagagttcactcatacagagccc
gaatcggataggaatttctctgtccaaagcaatacagtgatttctggatctaacaccctt
gagttcagtaatcccgattctggatttgagaatgatgggttccactactccctatcttca
ccgacagatagtatcgatatttctcagaaatatcagaccacaggagacactgaattcatc
gtcaacctctacgatgattctggaagtagcttcacgcataaagtgaagttcgatactgaa
acagatgaaattgtagtcgagaataattctggtactactctggggagtacatcgtattcg
ttccagaatgggactacttacgatctgaatgttgtgtatgagtccggtgatattgtagct
aatgttgatggtactcaggaggtttcaactggagtggtgtcgtatagtggtattgaggaa
gtaggatatactcataatactgtcaatcagggtactaattcgtacctcgatgatatgtct
gtatcgacagtaggctcgaccacatctactggcgatatagaggtttcagtttctgatgcg
ggcggtagcgggtctcctgtcgctgatactactgtagatcttgaggatagtggtggtaca
gtggtagcgacgaagacagtttcctcctcggacgctgataataaggtcacattcagcgga
tacacagcaggagaaacctacacagttcgagcgtctcaccctgactacgacaatgcgagc
aagacggtaacgaatacagagaatacaacggattcggtttcctttgacatggctcgtaca
atgggtacgatagaggtttcagaagttacggatacttctgccacagccattgattatcca
aatatcgatgtttatcgtgcgaacgatgggagttctgtgacgagcatagacggagctata
ctgccatacacagctgatgtgtggattgcttacgactacgatgttacagtagatgggtat
aacgaaggagtgtaccatccaaaaactaagacttacacggtaagcgatgggtcaacaacg
tctaagagttacacgcttgctgagatgcctaatgctgatttccaagatagcgataatgct
tcaactgttgaggaaggcacgagcgtcacaattgacgccagtgcctccagcgaccctgag
ggtgacacattgacctacagctgggatacgaacaatgatggaacgtttggggatgagtcg
ggaggtagctcgatcacagtatctgaatcctccgctggtacatacgagtacacagtcaag
gtgtcagataataatggagggactgatactgctacgtacacattgactgttgaagaacct
aatagcgcacctacagccgatttccaagattcagataatgctgagacgatcactgttgat
gggtctctcactctggatgcttctgccagtagtgatcctgatggagactcgctgacctat
tcatgggacaccaataatgacggaacctatggagatgaatcaggaggtagctcgatctca
gtgtccgagtcttcctctggaacgtacaattactcagtgaaggtatcagacggaaatggt
agtactgatacagctacattcactctgacagtagaggagccagcgacagggacgcttgag
attacaggtgttactgactctgatggtaattctctttcctcgttcgactacacgatcacc
cgtgttagcgacggaacgcaggttgcatctggtactggtgcttctgctccggtcagcaat
acgctcgccactggtgactacgatgtgactgtcaacaaggacatgtacaactcccaaaat
ctgaccctcacagtcacggagaatagcacaacgagtcagagcttcactatcgacaagaag
atgaaatcgttcaatatcgttgttgaggacgttgatgggaatcaactcgactcgttcgat
tacacggtttcagaagacggtacagatatcgtcgctggaacgagcagctacggaaatgat
gtgaaattagccgatatagaatatggcacatacacgtttgaggtgacttctgacggctat
gagagcgcctcgaagtcagcgactgtagatgatcagaaggatcaggtagtcttcactcta
tcagagtccacttcttcggatgatacgagtgatggatctggtggcggtggatctgggagc
aacacgacaaataatcatctcctcgtaattggggtgttcgtcttagtattcctgataatt
ctattgttcctcgcaattcgaaatcgggaagagtag
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