Halomicrobium sp. LC1Hm: LC1Hm_1389
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Entry
LC1Hm_1389 CDS
T06261
Name
(GenBank) Transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_1389
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_1389
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
MarR
HVO_A0261_N
HTH_Crp_2
HTH_45
HTH_11
HTH_IclR
WHD_RNase_R
DUF7343
Rrf2
HTH_13
HTH_27
DUF4423
WHD_RuvB
TrmB
DUF7347
Rio2_N
HTH_Cmi2_C
DnaD_N
SMC_ScpB
Mrr_N
HTH_3
HTH_69
YdaS_toxin
SoFic-like_C
RepL
EAP30
Sigma70_r4_2
DUF4364
FaeA
HTH_5
Motif
Other DBs
NCBI-ProteinID:
QGA82440
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Position
complement(1289609..1290415)
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AA seq
268 aa
AA seq
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MTDGAHDGTTVLQSKRSATQYQILIEIAERQPAVSQQEIADSIGITSQAVSNYLQDLVEN
EFVQKHGRGRYEVTKEGVDWLITQTTDLREFVDHVSDDVIGEVEIETAIATTAIEDGQAV
SLTMRDGVLHATPGEAGTATAVAVSAAEAGRDVGITDFDGVLEYDLGAVTIVSIPPIRDG
GSGDVDHAAVAAEARDHDLLAVSGTEAVATAHAADLDVDIQFATAAAVAEAATKGLDVCL
LAVADDLAGLTDTLRNGDAAFEIVEYDD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggggcacacgacggcaccacggtcctccagagcaagcggtcggcgacccag
taccagatcctcatcgagatcgccgagcgccagccggcggtcagtcagcaggagatcgcc
gacagcatcggcatcacctcgcaggcggtctcgaactacctccaggatctcgtcgagaac
gagttcgtccagaagcacggacgagggcgctacgaggtcaccaaggagggagtcgactgg
ctcatcacgcagacgaccgaccttcgggagttcgtcgaccacgtctctgacgacgtgatc
ggcgaagtcgagatcgagaccgccatcgcgaccaccgccatcgaggacggacaggcggtc
tcgctgacgatgcgagacggcgtgttgcacgcgacaccgggcgaggccgggacggcgacc
gcggtcgccgtctcggcggccgaggcgggccgggacgtgggtatcaccgacttcgacggc
gtcctggagtacgacctcggggcggtgacgatcgtctcgatcccgccgatccgcgacggc
gggagcggcgacgtggatcacgcggccgtcgccgcagaagcgcgcgaccacgacttgctc
gcggtctcgggcacggaggccgtcgcgacggcccacgccgccgacctcgacgtcgacatc
cagttcgcgacggcggccgccgtcgcggaggccgcgacgaaggggctcgacgtgtgtctg
ctggcggtggcggacgatctcgccggactgaccgacacgctgagaaacggtgacgcggct
ttcgaaatcgtcgagtacgacgactga
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