KEGG   Halomicrobium sp. LC1Hm: LC1Hm_1446
Entry
LC1Hm_1446        CDS       T06261                                 
Name
(GenBank) UvrD/REP helicase
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LC1Hm_1446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hall03032]
    LC1Hm_1446
Enzymes [BR:hall01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LC1Hm_1446
DNA replication proteins [BR:hall03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LC1Hm_1446
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LC1Hm_1446
SSDB
Motif
Pfam: AAA_12 AAA_11 AAA_30 Dna2 AAA_19 Viral_helicase1 AAA_16 SLFN-g3_helicase UvrD-helicase AAA_22 UvrD_C_2 bpMoxR ResIII DEAD AAA_24 SRP54 Helicase_RecD AAA NPHP3_N Mg_chelatase nSTAND3
Other DBs
NCBI-ProteinID: QGA82494
LinkDB
Position
1334829..1337636
AA seq 935 aa
MQLRGVAVEVSDEQTVDTQYGESDLCEVTVRPDDGRGEPVTVTLWGKWTETGAVLEPGMS
VAVYDAEPREYRGETQYSVGSDARIVVEPDFLVDVTDVRSWVQCPRMYYLNKLSGTPQAY
PVVKGTIVHEVFGDLLRGREVEEAVAAHVEDAGLDLGLLGRDAEEVAADVRDHAAAIDGW
LRQGTLTEEDEWRSEMTLLSARYGIKGRADAVRRGMPVELKTGKNTRREPRFQDKIQAAC
YALLLGERREEAPDTGTLLYTKNAAVERTEESGDLSPAKEFSINDGLLNFVVRTRNEIAA
MEYDASVPTGYEADSKCEYCFEQDTCMAVSGRLDQESKAGQVGTAIPDEEREYFDRFYQA
IEAERRAVHREYAKLWDQRPEERADDDRALIDLEPTGKRRLDGGRWELRARGTGAVSKIR
EGDIALASDGDPIDGDAEMARVERLGGETREERSDEGVSETRAGAKRHASRADEHSEPAD
GANGETREERSDDSTRGEIVVTTDEPVELRRLDVYPSEIGTDRMLTALHDGLLTQPPEQK
DVLFGRREPAFRSIDETFIDNNDAQNEAVRLAVGADDCALVHGPPGTGKTYTLARIVRAL
VARGDRVLLSAFTNRAVDNCIEALEAQGFTDIVRLGTESGVREDMQQYRLETAGDPDDCV
GRLEDASVVAATTASCGSRVAKTQSFDVAIVDEAGQLTEPGTLAATTLADRFVLVGDHQQ
LPPVVQSEDETLSRSLFERLIEAYPDASVLLDRQYRMAQQIQAFASREFYDGQLRPATGE
VAAQRIADLDGVTLDALPETLRDGVNFVDPDGHVDGNTNPAEASAVADVVDSYLAAGVET
EAVGVIAPYRAQVAEIDKHVPEGVAVDTVDRFQGSSKEVIVVSFVATGSLDGPIFEDYRR
INVALTRAKKALVLVGDERALSTDELYERMVEWAR
NT seq 2808 nt   +upstreamnt  +downstreamnt
gtgcaattacgcggcgtcgcagtcgaggtgagcgacgagcagaccgtcgacacgcagtac
ggtgagagcgatctctgtgaggtgacggttcggcccgacgacgggcgtggcgagcccgtc
accgtcacgctgtgggggaagtggaccgagaccggcgcggtgctcgaacccggcatgagc
gtcgccgtctacgacgccgaaccgcgcgagtaccgaggcgagacccagtactccgtgggc
agcgacgcacgcatcgtcgtcgaaccggactttctggtcgacgtgaccgacgttcgctcg
tgggtccagtgcccgcggatgtactacctcaacaagctctcggggaccccccaggcctac
ccggtcgtcaaggggaccatcgtccacgaggtcttcggcgacctgctccggggccgagag
gtggaagaggcggtcgcggcccacgtcgaggacgccgggctcgacctcgggctgctcggc
cgcgacgccgaggaggtcgccgccgacgttcgcgaccacgccgcggccatcgacggctgg
ctcaggcagggaaccctgaccgaagaagacgagtggcgatccgagatgacgctgctctcg
gctcgctacggcatcaaggggcgggccgacgccgtccggcgcgggatgccggtcgaactc
aagaccggcaagaacacccgcagagagccacgcttccaggacaagatccaggcggcctgc
tacgcgttgctcctcggcgagcgccgcgaggaagcgcccgacaccgggacgctgctgtac
accaagaacgccgccgtcgagcggaccgaggagtccggcgatctctcgccggccaaggag
ttctcgatcaacgacggcctgctgaacttcgtcgtccggacgcgcaacgagatcgcggcc
atggagtacgacgcgagcgtcccgacgggctacgaggccgactccaagtgcgagtactgc
ttcgagcaggacacctgtatggcggtctccgggcgactggatcaggagtcgaaggccggc
caggtcggcacggccatccccgacgaagagcgcgagtacttcgaccggttctatcaggcc
atcgaggccgagcgccgggccgtccaccgcgagtacgccaagctgtgggaccagcgcccc
gaggagcgagccgacgacgaccgcgccctgatcgacctcgaaccgacgggcaagcgccga
ctcgacggcggccgctgggagctgcgagcccgcggcacgggtgcggtctcgaagatccgc
gagggcgacatcgcgctcgccagcgacggcgacccgatcgacggcgacgccgagatggct
cgcgtcgagcgactgggtggcgagacgcgcgaggagcgaagcgacgagggggtctcggag
acgcgagcgggagcgaagcgacacgcgagccgtgcggacgagcacagcgagcccgcagac
ggtgcgaacggcgagacgcgcgaggagcgaagcgacgattcgacccgcggtgagatcgtc
gtcacgaccgacgagccggtcgaactgcgccgactggacgtgtacccctccgagatcggc
accgaccggatgttgacggcgctgcacgacggcctgctcacccagccccccgaacagaag
gacgtgctcttcggccgacgcgagccagctttccgatcgatcgacgagacgttcatcgac
aacaacgacgcccagaacgaggcggtccggctcgccgtcggagccgacgactgcgcgctc
gtccacgggccgccgggaacgggcaagacctacacgctcgcccggatcgtccgggcgctg
gtggcccgcggcgatcgggtgttgctctcggcgttcaccaatcgcgcggtggacaactgc
atcgaggccctcgaagcgcagggctttaccgacatcgtccggctgggcaccgagagcggc
gtccgcgaggacatgcagcagtaccgcctggagactgccggcgatcccgacgactgcgtc
ggccggctggaggacgcgagcgtcgtcgcggcgacgacggcctcctgtggctctcgggtc
gccaagacccagtcgttcgacgtggcgatcgtcgacgaggccggccagctcactgagccg
gggacgctggccgcgacgacgctggccgatcggttcgtcctcgtcggcgaccaccagcag
ctcccgccggtcgtccagagcgaggacgagacgctctcgcggtcgctgttcgagcggctc
atcgaggcctatcccgacgccagcgtcctgctcgaccgccagtatcggatggcccagcag
atccaggcgttcgcctcccgggagttctacgacggccagctccggccggccaccggcgag
gtggcggcccagcgaatcgcggacctggacggcgtcacgctcgacgcgctcccggagacg
ctgcgtgacggcgtcaacttcgtcgatcccgacgggcacgtcgacggcaacacgaacccg
gcggaggcgagcgcggtcgccgacgtggtcgattcctacctcgctgccggggtcgagacc
gaggccgtcggcgtgatcgcgccctaccgcgcgcaggtcgccgagatcgacaaacacgtc
cccgagggggtcgccgtcgacacggtcgatcgcttccagggatcgagcaaggaggtcatc
gtcgtctccttcgtcgccacggggtcgctcgacggcccgatcttcgaggactaccgccgc
atcaacgtcgccctgacgcgagcgaagaaggcgctcgtgctggtcggcgacgaacgcgcg
ctctcgacggacgaactgtacgaacggatggtcgagtgggctcgctga

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