Halomicrobium sp. LC1Hm: LC1Hm_1521
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Entry
LC1Hm_1521 CDS
T06261
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00730
Thiamine metabolism
hall01100
Metabolic pathways
hall01240
Biosynthesis of cofactors
Module
hall_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LC1Hm_1521 (thiC)
Enzymes [BR:
hall01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LC1Hm_1521 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
QGA82568
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All DBs
Position
1399689..1401116
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AA seq
475 aa
AA seq
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MTTQLQRASDGEITPAMERIAERENVDAEFVRQQVADGQAVIPANVGHETLDPMIIGREF
STKVNANIGNSEETSDLDGELEKLHTAVHYGADTVMDLSTGANLDEIREANVEHSPVPVG
TVPIYEAVKRAGSPEEITHDLLLDVIEKQAEQGVDYMTIHAGVLMEHLPLTDGRKTGIVS
RGGSIMAKWMEENGMQNPLYTKYEEICEIFREHDVTFSLGDGLRPGCIADASDEAQFAEL
DTLGELTRKAWDEGVQVMVEGPGHVPMDEVADNVERQQEVCDGAPFYVLGPLVTDIAPGY
DHITSAIGATEAGRAGAAMLCYVTPKEHLGLPEREDVREGLAAYRIAAHAADVANGRDGA
SDWDDALSEARYAFDWSEQFELALDPERAKEYHDQTLPGDNYKDARFCSMCGVEFCSMRI
DQDAREGDEMASIADETDLEGSAAASVNRPPVGTHDSDAELHHHEGRPTVVGDDD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccagctccagcgtgccagcgacggagagatcacaccggcgatggaacggatc
gcagagcgcgagaacgtcgacgccgagttcgtccgccagcaggttgcggacgggcaagcc
gtgattccggccaacgtcggccacgagacgctcgacccgatgatcatcggccgggagttc
tcgacgaaggtcaacgccaacatcggcaacagcgaggagacgagcgatctcgacggcgaa
ctggagaagctccacaccgcagtccactacggcgcggacacggtgatggacctctcgacg
ggcgcgaacttagacgagatccgcgaggccaacgtcgagcattcgccggtcccggtcggg
acggtcccgatctacgaggccgtcaagcgagcgggcagtcccgaggagatcacccacgac
ctcctgctggacgtgatcgagaagcaggccgagcagggggtcgactacatgacgatccac
gcgggcgtgctgatggagcacctcccgctgaccgacggccgcaagaccgggatcgtctct
cgcggcgggtcgatcatggccaagtggatggaggaaaacgggatgcagaatcccctgtac
acgaagtacgaggagatctgcgagatcttccgcgaacacgacgtgaccttcagtctcggc
gacggcctgcggcccggctgtatcgccgacgcgagcgacgaggcacagttcgcagagctg
gacaccctgggtgaactgacccgcaaagcgtgggacgagggcgtccaggtgatggtcgag
ggaccaggccacgtcccgatggacgaggtcgcggacaacgtcgagcgccagcaggaggtc
tgtgacggcgcgccgttctacgtcctcggcccgctggtgaccgacatcgcgccgggctac
gaccacatcaccagcgcgatcggcgcgacggaggccggacgcgcgggcgcggcgatgctg
tgttacgtcacgccgaaagaacacctcggcctgcccgagcgagaggacgtgcgagagggg
ctcgccgcctaccggatcgccgcacacgccgccgacgttgccaacggccgcgacggagcc
agcgactgggacgacgctctctccgaggcccgctacgccttcgactggtccgaacagttc
gaactcgcgctggaccccgagcgcgccaaggagtaccacgaccagacgttgccgggtgac
aactacaaggacgcccgcttctgttcgatgtgtggcgtcgagttctgctcgatgcggatc
gatcaggacgcacgggagggcgacgagatggcgtcgatcgccgacgagaccgacctcgaa
gggtcggcggccgcgtcggtgaaccgaccgcccgtcggcacccacgacagcgacgccgaa
ctgcaccaccacgagggccgacctaccgtcgtcggcgacgacgactga
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