Halomicrobium sp. LC1Hm: LC1Hm_1546
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Entry
LC1Hm_1546 CDS
T06261
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_1546
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_1546
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Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_20
MarR_2
HTH_5
HTH_IclR
HTH_Cmi2_C
HTH_24
Keratin_assoc
Rrf2
DUF2250
Motif
Other DBs
NCBI-ProteinID:
QGA82593
UniProt:
A0A5Q0ULN4
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Position
complement(1424760..1425812)
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AA seq
350 aa
AA seq
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MPRDDLRDALEQVITVFDLGEYEVTAYLAVLEHGELSASELSEHTDIPQPRVYDTVRSLS
DVGLVELKDSRPMTVLAIDPREAFDDVQSSLDSLVDDLSRRYTAPTRKPEAVSLVKSRPT
ILRYLEDIITAAEYELMLSLTPRLLDRFEDALRSVHDEGVAIEIVVSPAAKAPPAGEFDY
RSLATTVKGRRGITTPVVAVADGNYSMYATRESVRGNNDRYGVIFNRSELGFLVSGFLNT
VLWTTAETIVGNGENLSFPRRYGTIRRCISDLQALDGEFYAAIEGRDVESGDPRVVEGRI
VEAEFGRNREVATLTVEGEDGRVAVGDRVAAYEDIEAFTIGVGRDEPPTT
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgacgacctccgggacgcactggagcaggtcatcaccgtcttcgatctcggt
gagtacgaggtcacggcctacctcgcggtgctggaacacggcgagctctccgcgtcggag
ctgtccgagcacacggacatcccacagccacgggtctacgacaccgtccgcagtctcagc
gacgtcggcctcgtcgagctgaaggacagccgaccgatgacggtgctcgcgatcgatcca
cgggaggccttcgacgacgtgcagtcttcgctggactccctcgtggacgacctctcgcgg
cgctacaccgcgccgacgcgcaagcccgaggcggtctcgctggtgaagtcgcgcccgacg
atactgcgctatctcgaagacatcatcaccgccgccgagtacgagctgatgctgtcgctg
accccgcggctgctcgaccggtttgaggacgcgctccggtcggtccacgacgagggcgtc
gccatcgagatcgtcgtctcgccggccgccaaagccccgcctgccggcgagttcgactat
cggagcctcgccacgactgtcaaaggccggcgcgggatcacgacgccggtcgtcgccgtc
gccgacggcaactactcgatgtacgccacccgcgagagcgtgcgagggaacaacgaccgc
tacggcgtcatcttcaaccgctctgagcttggctttctcgtctcgggctttctcaacacg
gtgctgtggacgaccgccgagacgatcgtcggcaacggcgagaacctgtcgtttccccgg
cgatacgggacgatccgacggtgtatctccgatctgcaggccctcgacggcgagttctac
gcagccatcgagggacgggatgtcgagagcggcgatccgcgcgtcgtcgagggccggatc
gtcgaggccgagttcggccgcaaccgcgaggtcgcgaccctgacggtcgaaggcgaggac
ggacgcgtcgccgtcggggaccgcgtggcggcctacgaggatatcgaggcgttcaccatc
ggcgtcggccgcgacgagccgccgacgacgtag
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