Halomicrobium sp. LC1Hm: LC1Hm_1557
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Entry
LC1Hm_1557 CDS
T06261
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_1557
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_1557
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
TrmB
HTH_24
HTH_IclR
PLDc_2
PadR
MarR
HTH_5
HTH_27
Motif
Other DBs
NCBI-ProteinID:
QGA82604
UniProt:
A0A5Q0UM02
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Position
complement(1436458..1437534)
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AA seq
358 aa
AA seq
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MKDDDLIDVLEDAGLSPYQAEAYVTLLELGSASATDIADACDVPDPRIYDVLRDLESKGY
IETYQQDSLTARAHDPETVLDDLRSRSSEYLSAAEEIEDRWNQPAVAEHEVSIVKRFETV
MNRAREIIDNAEKQIQIAVDVDQFHSLKDALGDARDRGVHVKLSLCTREGDRLPSEEALA
SVCTEARHRDTPSPFLVLVDRRWTCFAPHSQSVNEYGVLVSDRTHTYVFHWFFLTCLWEI
WDTIYTLRTPETPTTYVDLRHCVRDVDPLLEEGATIVATVEGYETDTHETVTLHGRITRV
RYTGETAGRDQQLPLSQLAGRVSITLETDDGPVEVGGWGAVIEEVEASEITIEDVRYD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacgacctcatcgacgttctcgaagacgcggggctgtctccgtatcaggcg
gaggcctacgtgaccctgctcgaactcgggagcgcctcggcgaccgacatcgcggacgcg
tgtgacgtgcccgatccgcggatctacgacgtgctccgtgacctcgagtccaaggggtac
atcgagacgtaccagcaggacagtctcacggcacgcgcccacgacccggagacggtactg
gacgacctccggtcccgatccagcgagtacctctcggcggccgaagagatcgaggaccgc
tggaaccagcccgccgtcgccgaacacgaggtgagcatcgtcaagcggttcgagacggtg
atgaaccgcgcccgcgagatcatcgacaacgccgagaaacagatccagatcgcggtcgac
gtcgaccagtttcactcgctgaaggacgcgctcggggacgcacgcgaccgcggcgtccac
gtcaaactcagcctctgtacccgcgagggcgatcggctgccatccgaggaagcactcgcg
agcgtctgtaccgaagcccgccaccgagacacgccttccccgttcctcgtgctcgtggac
cgacggtggacctgctttgcgccacacagccagtcggtcaacgagtacggcgtcctcgtc
agcgaccgaacccacacgtacgtgttccactggttcttcctcacctgcctctgggagatc
tgggacaccatctacacgctccgaacgccggagacgccgacgacgtacgtcgacctccgt
cactgcgtccgcgacgtggatccgctgctggaggagggcgcgacgatcgtcgcgaccgtc
gagggatacgagacggacacccacgagaccgtcacgctccacggtcggatcacgcgcgtg
cggtacacgggcgagaccgccggtcgcgaccagcaactcccgctgtcacagctcgcgggt
cgggtgagcatcacgctcgaaaccgatgacggaccggtcgaagtcggcgggtggggagcc
gtgatcgaggaagtcgaggcctcggagatcacgatcgaggacgttcgctacgactga
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