Halomicrobium sp. LC1Hm: LC1Hm_1585
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Entry
LC1Hm_1585 CDS
T06261
Symbol
fadD
Name
(GenBank) Long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00061
Fatty acid biosynthesis
hall00071
Fatty acid degradation
hall01100
Metabolic pathways
hall01212
Fatty acid metabolism
hall02024
Quorum sensing
hall04146
Peroxisome
Module
hall_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LC1Hm_1585 (fadD)
00071 Fatty acid degradation
LC1Hm_1585 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LC1Hm_1585 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC1Hm_1585 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hall01004
]
LC1Hm_1585 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hall04147
]
LC1Hm_1585 (fadD)
Enzymes [BR:
hall01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LC1Hm_1585 (fadD)
Lipid biosynthesis proteins [BR:
hall01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LC1Hm_1585 (fadD)
Exosome [BR:
hall04147
]
Exosomal proteins
Exosomal proteins of breast milk
LC1Hm_1585 (fadD)
Exosomal proteins of breast cancer cells
LC1Hm_1585 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QGA82631
LinkDB
All DBs
Position
1462076..1464031
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AA seq
651 aa
AA seq
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MPSWREAEREYSDEVVADTTIPELFEATAQRNSDRAAQLYKGGTYDRSLTPTVMPAAPDG
EYASITYDEMQSMVHNLAAGFRELGVDHDTRVGLFSSTRMEWALSDFAALAAGGIVTTVY
TESSPRQVKYLLSDPGADAVVVENEALLDRLLEVEDRLDLSFIVTIDEYDTDRDDVYTLG
ELHEIGAEAYDDARYQSWLEERSPSDLASLIYTSGTTGQPKGVKLTHRNFRSNVNQVYKR
LAPRPDKDPDHPTLSPGTTSISFLPLAHVFERLAGHFVMFAAGATVGYVEDPDTLADDIK
LIRPDTGASVPRVYERIFDRMRDQASESPIKERIFEWSTDVAREWARTDDPGPLLRLKHG
ISDRLVYSQLKENLGGNIEFMVSGGGSLSKELCETFLGMDLTIVEGYGLTETAPVVSVNP
PEDVRPGTMGVPVVDEEVKLDTHVVDQDDFETSRDVGELLVRGPNVADGYWNREKETAQS
FEPDGWFHTGDIVEQTEDDFLIYHDRLKEVIVLSTGKNVAPQPIEDAFSTSDRVAQAMVV
GDDQKFVAAMFVPNFEQLRRWADREGIDLPDSEAEMCDDDRVHEWIQEAVDEVNEDLEKV
ETIKKFVLVPREWTAENDLLTPSMKKKRRNIRKAFEDRLSEIYEEPVAMDD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcgtggcgtgaagcggagcgagagtactcggacgaggtcgtcgccgacacgacg
atcccggagctgttcgaggccaccgcacagcgaaactcggacagggccgcccagttgtac
aagggcggcacctacgaccgctcgctgacacccacagtgatgccggctgctccggacgga
gagtacgcctcgatcacctacgacgagatgcagtcgatggtccacaacctcgcggcgggc
tttcgcgaactcggcgtcgaccacgacacgcgcgtgggcctcttttccagtacgcgtatg
gagtgggcgctgtccgacttcgcggcactggcggccggcggcatcgtcacgacggtctac
accgagtcctccccacgtcaggtcaagtacctcctgagcgatcccggcgcagacgccgtc
gtcgtcgagaacgaggcgctgctcgatcggctcctcgaagtcgaagaccgactcgacctc
tcctttatcgtcaccatcgacgagtacgacaccgaccgcgacgacgtgtacacgctgggc
gagctccacgagatcggtgccgaggcctacgacgacgcccgctaccagtcctggctcgaa
gagcgctctccgtcggacctcgcgagcctcatctacacgtccgggacgaccggccagccg
aagggcgtcaagctcacccacagaaacttccgctcgaacgtcaaccaggtgtacaagcga
ctcgccccccgccccgacaaggacccggaccatccgacgctctcaccgggcaccacttcg
atctccttcctgccgctcgcacacgtcttcgaacggctcgccggccacttcgtgatgttc
gccgcgggtgcgacggtcggctacgtcgaggaccccgacacgctcgccgacgacatcaag
ctgatcaggcccgacaccggtgcgagcgtcccccgcgtctacgagcggatcttcgatcgg
atgcgcgatcaggccagcgagtcgccgatcaaagagcgcatcttcgagtggtcgaccgac
gtggccagagagtgggcccggaccgacgatcccgggccgctcttgcgcctgaaacacggc
atcagcgaccgacttgtctacagccagctcaaggagaacctcgggggcaacatcgagttc
atggtcagtggcggcggcagcctctcgaaggagctgtgcgagacgttcctcgggatggac
ctcacgatcgtcgaggggtacggtctcaccgagaccgccccggtcgtcagcgtcaacccg
cccgaagacgtgcgaccggggacgatgggcgttcccgtcgtcgacgaggaggtcaagctc
gacacccacgtcgtcgatcaggacgacttcgagaccagccgagacgtgggcgagttgctg
gtccgggggccgaacgtcgccgacggctactggaaccgggagaaagagaccgcccagtct
ttcgagcccgacggctggttccacaccggcgacatcgtcgagcagaccgaggacgacttc
ctgatctaccacgaccggctcaaggaggtgatcgtcctctcgacgggcaagaacgtcgct
ccccagccaatcgaggacgccttctcgaccagcgaccgcgtcgcacaggcgatggtcgtc
ggcgacgaccagaagttcgtcgcggcgatgttcgtcccgaacttcgagcagttgcgtcgg
tgggccgaccgcgaggggatcgacctgcccgacagcgaggccgagatgtgtgacgacgac
cgcgtccacgagtggatccaggaggccgtcgacgaggtcaacgaggacttagagaaagtc
gagacgatcaagaagttcgtgctggtacccagagagtggactgcagagaacgacctcctg
acgccgtcgatgaagaagaagcgccgcaacatcaggaaggccttcgaggaccgcctctcg
gagatctacgaagagcccgtcgcgatggacgactga
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