Halomicrobium sp. LC1Hm: LC1Hm_1606
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Entry
LC1Hm_1606 CDS
T06261
Symbol
ycaO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hall03009
]
LC1Hm_1606 (ycaO)
Ribosome biogenesis [BR:
hall03009
]
Prokaryotic type
ribosomal protein modification factors
LC1Hm_1606 (ycaO)
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QGA82651
UniProt:
A0A5Q0UMI2
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All DBs
Position
complement(1486949..1488655)
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AA seq
568 aa
AA seq
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MGSGPATDTLLATLDDLDVDIDHREAPAVDSADFAVVVGETGAATFETASEQALDGATPW
IAVELGGIGGQPTVPASIAGFDPDRECYDCLRGRVEANTTAAADGVDEPGPATRRVAGAV
AGAAVADYLADEPGAAGSSVLGHVVELPRQKRRFFPLPGCSCGGERDTTIDRAHAAVDIE
QALERAERALDDRVGIVQQVGEAESFPAPYYLAQLTDTSGFSAVTAPRQAAGVAADWDGA
FMKALGESYERYAAGVYTAAETTTATAASLDDAVAPEAFVAPDDADADATTELDWIDARN
LATDESALVPAELVFHPPTESRVRPPLTTGLGLGSSGCEALLAGLYEVIERDAAMLSWYS
TFEPLGLTVDDDVFGTLYDRAASEGLTVTPLLLTQDVDVPVVAVAVHRDEWPSFAIGSAA
DLDPEQAALGALEEALQNWMELRSMGPEQAAEASGAIGEYADKPERAVDLLAYDQTIPAE
AVGPDAVDDGEAELDALVAALSEAGLTPYATRTTTRDLDELGFEGVRVLVPEAQPLFLGD
AFFGERAETVPTELGFEPRLDRPHHPFP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggggagtggaccggcgacagacacccttctcgcgacactcgacgacctcgacgtggat
atcgaccaccgggaagcgcctgccgtcgacagcgccgacttcgcggtcgtcgtcggcgag
accggggcggcgacgttcgagaccgccagcgagcaggccctcgacggcgcgacgccctgg
atcgcggtcgagctcggcggtatcggtggccagccgacggtcccggcatcgatcgccggc
ttcgatcccgaccgggagtgctacgactgcctccgtggtcgcgtcgaagccaacacgacg
gcggccgccgacggcgtcgacgaacccggcccggcgacgcgccgtgtcgccggtgcggtc
gccggagcggccgtcgccgactacctcgccgacgaacccggagcggccgggtcgtcggtg
ctgggacacgtcgtcgagctaccccgtcagaaacgccgcttcttcccgctgccgggctgt
tcgtgtggcggcgagcgcgacacgacgatcgatcgcgcgcacgccgcggtcgacatcgag
caggcgctcgaacgcgccgagcgagcgctggacgaccgcgtggggatcgtccagcaggtc
ggcgaggcggagtcgttcccggcaccgtactacctcgcacagctcaccgacacgtcgggg
ttcagcgctgtcacggccccgcgacaggccgccggcgtcgcggccgactgggacggtgcg
ttcatgaaggcgctgggggagtcctacgagcgctacgctgccggcgtgtacacggccgcg
gagacgacgaccgccacggcggcgtcgctggacgacgcggtcgcgcccgaggccttcgtc
gcgcccgacgacgccgacgcggacgcgacgaccgaactcgactggatcgatgcccggaac
ctcgcgaccgacgagtcggcgctggtgcccgccgagctcgtctttcacccgcccaccgag
tcccgcgtccgtccgcccctgacgaccgggctgggactgggctcgtcgggctgtgaggcg
ctgttggccgggctctacgaggtgatcgaacgggacgcggcgatgctgtcgtggtactcg
acgttcgagccgctggggctgaccgtcgacgacgacgtgttcgggacgctgtacgaccgc
gccgcgtcggagggactgacggtgacgccgctgctgctgacacaggacgtggacgtgccc
gtcgtcgccgtcgccgtccaccgggacgagtggcccagcttcgccatcggctcggcggcc
gatctcgaccccgagcaggccgctctcggcgcgctcgaagaggcgctccagaactggatg
gagcttcggagcatgggccccgaacaggccgcggaggcgagcggcgcgatcggggagtac
gccgacaagccagagcgagccgtcgatctgctggcgtacgaccagaccatcccggccgag
gcggtcggtccagacgccgtcgacgacggcgaggccgaactggacgccctcgtcgcagcg
ctctcggaggccgggctgacgccgtacgcgacgcggacgacgacgcgagatctggacgaa
ctcggcttcgagggcgtccgcgtgctggtgcccgaggcccagccgctgttcctcggcgac
gccttcttcggcgagcgcgcggagacggtcccgaccgaactcggcttcgaaccgcgactc
gaccgtccacaccacccgttcccctag
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