Halomicrobium sp. LC1Hm: LC1Hm_1622
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Entry
LC1Hm_1622 CDS
T06261
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_1622
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_1622
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7436
TrmB
MarR_2
HTH_IclR
E2F_TDP
TbsP_N
HTH_9
Motif
Other DBs
NCBI-ProteinID:
QGA82667
UniProt:
A0A5Q0ULX9
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Position
1504084..1504872
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AA seq
262 aa
AA seq
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MTELGALGLSSYEEKVYRTLLLTGAATATELSEASGVPKGRIYDVLNGLEARKVVRLQSS
DPKQYVAVEPEAVVDRLLAERAHELREEWRHYRERAAAVRTNVLPTPPTESSFWLGSLGS
EEMQTALQEHTRTAEEFVHGIVGTPYENATWETLQREWEAFFEGASADLTVQLLVSEKVA
LTLPETFDRLIADQSGDVAVRTLPDVGLSFDVVDGIGTTIDIPHPVAADDRIGVLGIKDS
EIVEEFERHFQRLWAGAAPLVE
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacggagctgggtgcgctcggcctgtcgagctacgaggagaaggtgtatcggacgctg
ttactgacgggtgcggcgacggcgaccgagctctccgaggccagcggcgttccgaaaggt
cgcatctacgacgtgctcaacggcctcgaagcccggaaggtggtccgcctccagtcgagt
gatccgaagcagtacgtcgccgtcgagccggaggccgtcgtcgacaggctgctggccgag
cgggcacacgagctgcgagaggagtggcgacactaccgggagcgagcggcggcggtccgc
acgaacgtgctcccgacgccaccgacagagagcagcttctggctgggctcgctgggcagc
gaggagatgcagacggcgctgcaagagcacacgcgcaccgccgaggagttcgtccacggc
atcgtcgggacgccctacgagaacgcgacgtgggagacgctccagagagagtgggaggct
ttcttcgagggcgcgagcgcggatctgacggtgcagcttctcgtcagcgagaaggtggcg
ctgacgctgcccgagacgttcgaccggctgatcgccgaccagtccggcgacgtggccgtc
aggacgctgcccgacgtgggactgtccttcgacgtcgtcgacgggatcgggacgacaatc
gacatcccgcacccggtcgccgccgacgatcgaatcggcgtcctcggcatcaaggactcg
gagatcgtcgaggagttcgagcgccacttccagcggctgtgggccggtgcagcgccgctc
gtcgagtga
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