Halomicrobium sp. LC1Hm: LC1Hm_1624
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Entry
LC1Hm_1624 CDS
T06261
Symbol
mutY
Name
(GenBank) A/G-specific DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC1Hm_1624 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_1624 (mutY)
Enzymes [BR:
hall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
LC1Hm_1624 (mutY)
DNA repair and recombination proteins [BR:
hall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC1Hm_1624 (mutY)
Prokaryotic type
LC1Hm_1624 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF1823
Motif
Other DBs
NCBI-ProteinID:
QGA82669
UniProt:
A0A5Q0UPH3
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All DBs
Position
1505323..1506237
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AA seq
304 aa
AA seq
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MTELPGAVPENRDAVQQALIEWYEADHRSFPWRETDDAYEILVSEVMSQQTQLGRVVDAW
REFLDRWPDAEALAAADQSDVVAFWTAHSLGYNNRAKYLHTAANQVLDDWDGSFPETPDE
LQELHGVGPYTANAVASFAFNAGDAVVDTNVKRVLHRAFDVPDDDAAFEEVAGALMPDGR
SRVWNNAIMELGGVACEKTPACDAAGCPWREWCEAYDTGDFTAPDVPTQPDFEGSRRQMR
GRVVNVLGEYDRLALDELGPRVRVDYSPDGEYGREWLRGLVEDLADDSLVSVEDGDEELT
VCLR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacggagctgccgggcgcagtccccgagaaccgcgacgccgtccagcaggccctgatc
gagtggtacgaggccgaccaccggtcctttccctggcgcgagaccgacgacgcctacgag
atcctcgtctcggaggtgatgagccagcagacccagctgggccgcgtcgtcgacgcctgg
cgcgagttcctcgatcggtggcccgacgccgaggcgctagcggccgccgaccagtccgac
gtggtcgcgttctggacggcccactcgctggggtacaacaaccgggcgaagtacctccac
accgcggccaatcaggtcctcgacgactgggacggctctttccccgagacccccgacgaa
ctgcaggagctccacggcgtcggcccctacaccgccaacgcggtcgcctcgttcgcgttc
aacgcgggcgacgccgtcgtcgacacgaacgtcaagcgcgtcctccaccgcgcgttcgac
gtgcccgacgacgacgcggcgttcgaggaagtcgcgggggcgctcatgcccgacggacgg
tcgcgggtctggaacaacgcgatcatggaactcggcggggtcgcctgcgagaagacgccg
gcctgcgacgccgccggctgcccgtggcgcgagtggtgtgaggcctacgacaccggcgac
ttcaccgcgccggacgtgccgacccagcccgatttcgaggggagccgccgacagatgcgc
ggccgcgtcgtcaacgtcctgggcgagtacgaccgcctcgcgctcgacgaactcgggccg
cgcgtccgtgtcgactactccccggacggtgagtacggccgcgagtggctccgtgggctc
gtcgaggacctcgcggacgacagcctcgtcagcgtcgaggacggcgacgaggaactcacc
gtttgtctccgttga
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