Halomicrobium sp. LC1Hm: LC1Hm_1646
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Entry
LC1Hm_1646 CDS
T06261
Symbol
cysS
Name
(GenBank) Cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LC1Hm_1646 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hall01007
]
LC1Hm_1646 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hall03016
]
LC1Hm_1646 (cysS)
Enzymes [BR:
hall01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
LC1Hm_1646 (cysS)
Amino acid related enzymes [BR:
hall01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LC1Hm_1646 (cysS)
Transfer RNA biogenesis [BR:
hall03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LC1Hm_1646 (cysS)
Prokaryotic type
LC1Hm_1646 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1f
tRNA-synt_1
CysS_C
tRNA-synt_1c
UVR
Motif
Other DBs
NCBI-ProteinID:
QGA82691
LinkDB
All DBs
Position
complement(1526168..1527640)
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AA seq
490 aa
AA seq
DB search
MTNTLTGEREAFEPQDPDSVLLYYCGLTTSDPAHLGHARGWVHVDVMHRWLAHLGYDVRH
VENFTDVNEKIVARVGEDGESEADVARHYVQSVIDDMRALNLRRAEVYPRVSEHVPEIVA
MVETLIEKGYAYEANGSVYFDVTTFEEYGKLSNQQLDEIEAQGDPDEQSEKRNPADFALW
KAGGVDPAAIEEHQHEGASPPEAACETAQTWDAPWSEGRPGWHIECSAMSTTHLGETIDI
HVGGQDLVFPHHENEIAQSEAATGQQFARHWLHVRLLETKGEKMSSSLGNFFTVEAAVDE
YGTDVVRTFLLSTAYHNSAVYSEATIDEAIERWETLERGYERAVQACDDVDAYATVEDDT
LRTAVTTAREHFETAMNDDFNTREALAALTELVGAVNVHVDERSSFDYRALREAVETIEE
LGGGVLGLSFGGSEGGDVSVAEDLVELLLDVREAERAAGNYKRADELRDEIESLGVEVQD
TDDGPTYRLG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacacgctcaccggcgagcgagaggcgttcgagccacaggaccccgactccgtc
ttgctctactactgtggcctgacgacctccgatcccgctcatctgggacacgcccgcggg
tgggtccacgtcgacgtgatgcatcgctggctggcgcacctgggctacgacgtgcgtcac
gtcgagaacttcaccgacgtcaacgagaagatcgtcgcccgcgtgggcgaggacggcgag
agcgaggccgacgtggcccgccactacgtccagtcggtgatcgacgacatgcgcgcgctc
aacctccgacgcgcggaggtgtacccgcgcgtctccgaacacgtccccgagatcgtcgcg
atggtcgagacgctgatcgagaagggctacgcctacgaggccaacggctcggtgtacttc
gacgtgacgaccttcgaggagtacgggaaactctcgaaccagcaactcgacgagatcgaa
gcccagggcgatccggacgagcaaagcgagaagcgaaaccccgcggacttcgcgctgtgg
aaggccggcggcgtcgatccggcggcgatcgaagagcaccagcacgagggagcgtcgccc
cccgaagcggcctgtgagaccgcccagacctgggacgccccgtggagcgagggccgaccc
ggctggcacatcgagtgctcggcgatgagcacgacccacctcggagagaccatcgacatc
cacgtcggcggtcaggacctcgtcttcccccaccacgaaaacgagatcgcacagagcgag
gccgcgaccggccagcagttcgcgcgccactggcttcacgtccgcctcttggagacgaaa
ggcgagaagatgtcctcgtcgctgggcaacttcttcacggtcgaggcggccgtcgacgag
tacgggacggacgtggtccggacgttcctgctgtcgacggcctaccacaacagcgccgtc
tacagcgaggcgacgatcgacgaggcaatcgagcgctgggagacgctcgaacgaggctac
gaacgggccgtacaggcgtgtgacgacgtagacgcgtacgcgacggtcgaagacgacacg
ctccggacggccgtcaccaccgcccgcgagcacttcgagacggcgatgaacgacgacttc
aacacacgcgaggcgctcgcggcgctgaccgaacttgtcggtgccgtcaacgtccacgtc
gacgagcggtcgtcgttcgactaccgggcgctgcgtgaggccgtcgaaacgatcgaggaa
ctgggcggtggcgtcctcgggctctcgttcggtggctccgagggcggcgacgtgtcggtc
gccgaggatctcgtcgaactcctgctggacgtgcgcgaggccgagcgagccgccggcaac
tacaagcgagcggacgaactccgagacgagatcgagtccctcggtgtcgaagtacaggac
accgacgacggcccgacctaccgactcggatag
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