Halomicrobium sp. LC1Hm: LC1Hm_1764
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Entry
LC1Hm_1764 CDS
T06261
Symbol
alkA2
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC1Hm_1764 (alkA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_1764 (alkA2)
Enzymes [BR:
hall01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LC1Hm_1764 (alkA2)
DNA repair and recombination proteins [BR:
hall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC1Hm_1764 (alkA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
OGG_N
Motif
Other DBs
NCBI-ProteinID:
QGA82807
UniProt:
A0A5Q0UMH9
LinkDB
All DBs
Position
complement(1631002..1631910)
Genome browser
AA seq
302 aa
AA seq
DB search
MERGQIAIASLPGGVDLQSTVESGQSYLWDRSDGRMYEQDGVHGGSAWYWTTVRVDGRAH
VIRVRQRDGHLEWESDIDATPHLRRLLRLDDDLEAIRATAPDDAVVQDAYDEYWGMRLVR
DPPFGSLISFICSAQMRVGRIHGMQQALRETYGDPVTFDGETYHAYPTPEQLAATTEEAL
RDLGLGYRAPYVLRTATMVAEGEADPQAARGMAYEDARDHLTQFVGVGDKVADCVLLFSL
DFLEAVPLDTWIKTTIEEYFPAADRGNYADTSRAIREALGGEYAGYAQTYVFHYLRSGGD
QT
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaacggggccagatagcgatcgcgagcctgcctggtggcgtcgacctccagtcgacg
gtcgagagcggccagtcgtacctctgggaccgctctgacggtcggatgtacgagcaggac
ggcgtacacggcggctcggcgtggtactggacgactgtcagagtcgacggccgagcccac
gtgatcagggttcgacagcgcgacggccacctcgaatgggagagcgacatcgacgcgacg
ccacacctccggcggctgctccggctggacgacgacctcgaagcgatccgtgcgacggca
cccgacgacgccgtcgtccaggacgcgtacgacgagtactgggggatgcgtctcgtccgc
gatccgccgttcggctcgctgatctccttcatctgctcggcacagatgcgcgtgggccgc
atccacgggatgcaacaggcgctgcgcgagacgtacggcgatccggtcacgttcgacggc
gagacctaccacgcgtacccgacgccggaacagctggcagcgacgacagaggaggcgctg
cgagacctcgggctgggctaccgagcgccgtacgtcctgcggaccgcgacgatggtcgcc
gagggcgaagcagacccacaagcggcccgcgggatggcctacgaggacgctcgcgaccac
ctcacccagttcgtcggcgtcggggacaaggtcgccgactgcgtgttactgttctcgctc
gatttcctcgaagcggtcccgctggacacctggatcaagacgaccatcgaggagtacttc
ccggctgccgatcggggcaactacgcagacacctcgcgggcgatccgcgaggccctcggc
ggcgagtacgccggctacgcgcagacgtacgtgtttcactacctccgaagcggcggcgac
cagacgtga
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integrated database retrieval system
