Halomicrobium sp. LC1Hm: LC1Hm_1820
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Entry
LC1Hm_1820 CDS
T06261
Symbol
livK4
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall02010
ABC transporters
hall02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC1Hm_1820 (livK4)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC1Hm_1820 (livK4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hall02000
]
LC1Hm_1820 (livK4)
Transporters [BR:
hall02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LC1Hm_1820 (livK4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
QGA82862
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All DBs
Position
complement(1684632..1686047)
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AA seq
471 aa
AA seq
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MDLTVTRRRAIRSLGGAGVVALAGCTGDGGDGDTEASGDGGDTETNMQDTSTTQSSSQRL
SIGVLQPLSGDLAYYGQQGLWGLLSGLAYKADADPPTDVGTGTTTVSAGDVEYELIVRDT
EFTADGAQSAATDLVSNEGVDMLFGCSSSGAASRVITNVVKASSVPMMVGPAASAGITAE
SETCGDLVYRASENTAMDARSGGRYVATETDVSKVYLFGADYSFGRAVVNNYRSVLESEG
IEIVGERFVNQGYSEWDGLLENAEDAGAEGIVGGFTVATLPNLFSAFLSGDYSYRAFGGF
ATRITNAVVGQTMQRVLGDPLTEEKIEGAGLGPFTTRYHWNQYDNPINDAFVESYTNAYG
VVPDLFTAGTFTGASAIHQAVTEGSSTDPDDITGALKGMTVTDTPKGENGYTFQEYNNQA
RSEMTVANPVPTQDQWADSWDSLIQPGDPLARISGDQVTIPADSDDMNCSL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacctgactgtcacgagacggcgtgcgatccgatcgctcggtggtgcgggcgtcgtc
gcgctcgcgggctgtaccggcgacggtggtgacggcgacacggaggcgagtggcgacggc
ggcgacacggagacaaacatgcaagacacgtcgacgacacagtcgagttcgcaacggctc
tcgatcggtgtcctccagccgctctcgggggacctggcgtactacggtcagcagggcctc
tggggactgctctccgggctcgcgtacaaggccgacgccgatccgcccaccgacgtgggc
accgggacgacgacagtctcggccggcgacgtggagtacgagctgatcgtccgcgacacg
gagttcaccgccgacggcgcgcagtcggccgcgacggatctggtgagcaacgagggcgtc
gacatgctctttggctgttcgtcctcgggcgcggcctcgcgtgtcatcaccaacgtcgtg
aaggcgtcgtcggtcccgatgatggtcgggccggcggcgtcggcggggatcaccgccgag
agcgagacctgcggcgatctggtgtaccgtgccagcgagaacacggcgatggacgcccgc
tctggcggccggtacgtcgccaccgagaccgacgtatcgaaggtgtacctgttcggcgcg
gactacagcttcggccgggccgtcgtcaacaactaccgatcggtgctggagtccgagggc
atcgagatcgtcggcgagcggttcgtcaaccaggggtactcggagtgggacgggctgctg
gagaacgcagaagacgcgggcgcggaggggatcgtcggcgggttcaccgtcgcgacgctc
ccgaacctgttcagcgccttcctctcgggcgactactcctatcgcgccttcggcgggttc
gccacccggatcacgaacgccgtcgtcggccagacgatgcagcgcgtgctcggcgacccg
ctcacagaggagaaaatcgagggcgcgggactgggaccgttcacgacgcgctatcactgg
aaccagtacgacaacccgatcaacgacgccttcgtcgagtcgtacacgaacgcctacggc
gtcgttcccgacctctttaccgcaggcacgttcacgggcgcgtcggcgatccaccaggcc
gtcaccgagggcagctcgacggacccagacgacatcacgggcgcgctcaaggggatgact
gtcaccgacacgccgaaaggcgagaacggctacaccttccaggagtacaacaaccaggcc
cgttcggagatgaccgtcgccaaccccgttccgacacaggaccagtgggccgacagctgg
gactcgctcatccagcccggcgatcccctggcccgaatctccggcgaccaggtaacgatt
ccggcagacagcgacgacatgaactgctcgttgtaa
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