Halomicrobium sp. LC1Hm: LC1Hm_1915
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Entry
LC1Hm_1915 CDS
T06261
Symbol
pccA
Name
(GenBank) Acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein
KO
K11263
acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.4.1.-
6.3.4.14
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00061
Fatty acid biosynthesis
hall00280
Valine, leucine and isoleucine degradation
hall00620
Pyruvate metabolism
hall00630
Glyoxylate and dicarboxylate metabolism
hall00640
Propanoate metabolism
hall01100
Metabolic pathways
hall01110
Biosynthesis of secondary metabolites
hall01120
Microbial metabolism in diverse environments
hall01200
Carbon metabolism
hall01212
Fatty acid metabolism
Module
hall_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
LC1Hm_1915 (pccA)
00630 Glyoxylate and dicarboxylate metabolism
LC1Hm_1915 (pccA)
00640 Propanoate metabolism
LC1Hm_1915 (pccA)
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LC1Hm_1915 (pccA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LC1Hm_1915 (pccA)
Enzymes [BR:
hall01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
LC1Hm_1915 (pccA)
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
LC1Hm_1915 (pccA)
6.4.1.3 propionyl-CoA carboxylase
LC1Hm_1915 (pccA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
ATP-grasp
GARS_A
Dala_Dala_lig_C
HlyD_D23
GCV_H
CoA_binding_2
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QGA82956
UniProt:
A0A5Q0UN17
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Position
1781554..1783395
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AA seq
613 aa
AA seq
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MFDKVLVANRGEIAVRVMRACEELGVETVAVYSEADKHSGHVRYADEAYNVGPARAADSY
LDQEAIVDAARQADADAIHPGYGFLAENADFAARVEATDGITWVGPESDSMESLGEKTKA
RTIMSAADVPIVPGTTDPVTDPEQVHEFGDENGYPIAIKAEGGGGGRGMKIVESPDEVED
QLESAKREGEAYFSNDSVYLERYLENPRHIEVQIIADHHGNVRHLGERDCSLQRRHQKVI
EEGPSPALSDELRERIGEAARRGVSEAGYYNAGTVEFLVEEQDREPGELLGPDANFYFLE
VNTRIQVEHCVTEEITGIDIVKWQLRVAADEELGFAQDDVAVDGHAIEFRINAENAADDF
APATGGTLETYDPPGGVGVRMDDALRQGDELVTDYDSMIAKLIVHAGDREEAIERGKRAL
GEYDIEGIPTIVPFHRLMLTDDEFVQGMHTTKYLDETLDPERIDAAQERWGTETTTDADD
EEVTEREFTVEVNGKRFDVELEERGAPPIEVGEIESGDGGDRPQRPGGGGSDSGGDGGGA
SAEGDEVTAEMQGTILEVNVDEGDEVEAGDVVCVLEAMKMENDIVAERGGTVTQVAVDEG
ESVDMGDLLFVVG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaggttctcgttgcgaaccgcggcgagatcgcggttcgggtcatgcgggcc
tgcgaggaactgggggtcgaaaccgtcgcggtctactccgaagccgacaagcactcgggc
cacgtcagatacgccgacgaggcgtacaacgtcggcccggcccgcgcggccgactcctat
ctcgatcaggaggcgatcgtcgacgccgcccgacaggccgacgccgacgcgatccacccc
ggctacggcttcctcgcggagaacgccgacttcgcagcccgggtcgaggccaccgatggg
atcacctgggtcggtcccgagagcgactcgatggagtcgcttggcgagaagacgaaggcc
cgcacgatcatgtcggccgccgacgtgcccatcgtcccggggaccaccgacccggtgacc
gaccccgaacaggtccacgagttcggcgacgagaacggctatccgatcgcgatcaaggcc
gagggcggcggtggcggccgcggcatgaagatcgtcgagagccccgacgaagtcgaggac
cagctcgaatcggccaaacgcgagggcgaggcgtacttctcgaacgactccgtctacctc
gaacgctacctcgaaaatccgcgccacatcgaggtccagatcatcgcggaccaccacggc
aacgtccgacacctgggcgagcgcgactgctcgcttcagcgccgtcaccagaaggtcatc
gaggagggacccagtcccgccctgtcggacgaactccgcgaacggatcggggaggccgct
cgccggggcgtctccgaagccggctactacaacgccggcaccgtcgagttcctcgtcgag
gagcaagaccgcgagcccggcgaactgctcggtcccgacgcgaacttctacttcctcgaa
gtgaacacgcgcatccaggtcgagcactgcgtcaccgaggagatcacggggatcgacatc
gtcaagtggcagctcagggtcgccgccgacgaggagctgggcttcgcccaggacgacgtg
gcggtcgacggccacgccatcgagttccggatcaacgcggagaacgccgccgacgacttc
gcacccgcgaccggggggaccctcgaaacgtacgatccgcccggcggcgtcggcgtccgg
atggacgacgcgttgcggcagggcgacgaactggtgaccgactacgactcgatgatcgcg
aagctcatcgtccacgcgggcgaccgcgaggaggccatcgagcggggcaagcgcgcgctc
ggcgagtacgacatcgagggaatcccgacgatcgtccccttccaccggctgatgctcacc
gacgacgagttcgtccagggcatgcacacgacgaagtacctcgacgagacgctcgatccc
gagcgcatcgacgccgcacaggagcggtgggggaccgagacgaccaccgacgcggacgac
gaggaggtgaccgaacgggagttcaccgtcgaggtcaacggcaagcgcttcgacgtggag
ctggaagaacgcggcgcgccaccgatcgaggtcggtgagatcgagagcggcgacggcggc
gaccgcccccagcggcccggcggtggcggctcggattcgggcggcgacggcggcggggcc
agcgccgagggcgacgaagtgaccgcggagatgcagggcacgatcctcgaagtcaacgtc
gacgaaggcgacgaggtcgaagccggcgacgtggtctgcgtgctcgaagcgatgaagatg
gagaacgacatcgtggccgaacgcggcggcaccgtcacccaggtggccgtcgacgagggc
gagtccgtcgacatgggtgacctgctgttcgtcgtcgggtga
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