Halomicrobium sp. LC1Hm: LC1Hm_1964
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Entry
LC1Hm_1964 CDS
T06261
Symbol
tmcA
Name
(GenBank) tRNA(Met) cytidine acetyltransferase
KO
K06957
tRNA(Met) cytidine acetyltransferase [EC:
2.3.1.193
]
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hall03016
]
LC1Hm_1964 (tmcA)
Enzymes [BR:
hall01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.193 tRNAMet cytidine acetyltransferase
LC1Hm_1964 (tmcA)
Transfer RNA biogenesis [BR:
hall03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LC1Hm_1964 (tmcA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_RecD
GNAT_acetyltr_2
TmcA_N
AAA_30
DEAD
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGA83003
UniProt:
A0A5Q0UMT3
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Position
complement(1819522..1821756)
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AA seq
744 aa
AA seq
DB search
MELAARLRSEAQRADERRVLVLTGTPSATRDAAADALDAAGVSSEALTVVGPADGLPGEH
LDTVHAGELLGRTRSAVVLDCHEACRPNALGAAVGAVDGGGLLLVLAPSLADWPDRRDAF
DERLAVPPATVEDVAGQFRTRLVETLRAHPAIAVVDADSGTIERSGLTDPAPRVPRGRPA
SPDDHDFPRAAYDACLTDDQVAAVRGFEPLADPGNALVVEADRGRGKSSAAGLAAGALAR
DGLDVLVTAPQYRSAREVFDRAGELLSTVGALRGRDDPETPHELRTADGRVRYADPTAAA
TATDEADLVIVDEAAALPVRVLERFLDAPSVAFTTTVHGYEGAGRGFSVRFRSRLADSDF
AVCERQLTEPIRYAPGDPVESWVFRALLLGARPAVDQVVTDATPDSVEYERCDSRRLLDD
EHLLREVFGLLVLAHYRTEPDDLARLLDAPNVGVRALTHDGHVVSVALLAREGDLPATLR
AEMYEGGRVRGNMIPDVLTTQLRDEAAGVPVGQRVLRIATHPAVRSRGLGSRLLDEIADE
FADAVDWLGVGYGATPELVDFWADSGYRSVHCSTTRNDRSGEYSAIMLRPCSTAGEALAD
RHASWFRDRIAGVLSDPLDDLDPDVARTVLRAVDGTPEIDLSEPERRLVAGIPGGAGVFD
TAPEPVRRLALAHLVAPAEPDALTDDQERLLVRKALQGHDWDRVADELGFVSTAECMRAL
GRTVERLVRLYGDDALTEELDRHT
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggaactggcggcacggctccgttcggaagcacagcgcgccgacgagcggcgcgtcctc
gttctcaccggcacgccgtcggccacccgcgacgcggcggccgacgcgctcgacgcggcg
ggcgtgagcagcgaggcgctcacggtcgtcggtccggccgacggtctccccggcgaacac
ctcgatacggtccacgctggcgagctcctgggccggacccgcagcgccgtcgtgctggac
tgtcacgaggcctgtcggcccaacgcgctcggagcggccgtcggtgccgtcgacggtggg
ggactcttgctcgtgctcgcgccctcgctggcggactggcccgacagacgcgacgcgttc
gacgagcgcctcgccgttccgcccgcgaccgtcgaagacgtggcggggcagttccggacg
cgactggtcgagacgctccgggcacaccccgctatcgccgtggtcgacgccgacagcgga
acgatcgagcggtcggggctcaccgaccccgctccgcgcgtgcccagaggccggcccgcc
tcgcccgacgaccacgacttcccgcgggcggcctacgacgcctgcctgaccgacgaccag
gtcgcggccgtgcgcgggttcgagccactggccgacccgggcaacgcgctggtcgtcgaa
gccgaccgcggtcggggcaagtccagcgccgccggcctggccgcgggcgcgctggcacga
gacgggctcgacgtgctcgtgaccgcgccccagtaccggagcgcgcgcgaggtgttcgac
cgggccggcgagctactctcgacggtgggcgcactccggggacgcgacgaccccgagacg
ccccacgaactccggacggccgatggacgggttcgctacgccgatccgacggcggccgcg
acggcgaccgacgaggcagacctcgtgatcgtcgacgaggccgccgcgctcccggttcgg
gtcctcgaacggttcctcgacgcgccctcggtcgcgttcaccacgacggtccacggctac
gagggggccggccgaggtttctcggtccggttccggtcgcggctggccgacagcgacttc
gcggtgtgtgagcgccagctgaccgagccgatccgctacgcgcccggcgatcccgtcgag
tcgtgggtcttccgtgcgctgttgctcggcgcgcggccggccgtcgaccaggtggtcacc
gacgcgacccccgacagcgtcgagtacgagcggtgtgactcccggcgcttgctcgacgac
gagcacctgctgcgggaggtcttcgggctgctcgtcctcgctcactaccgaacggagccc
gacgacctcgcgcgactgctcgacgcgcccaacgtcggcgtccgggcactcacccacgac
ggacacgtcgtctcggtcgccctgctggcccgcgagggcgatttgccggcgacgcttcgg
gcggagatgtacgagggcggacgggtccgtggcaacatgatccccgacgtgttgacgacg
caactgcgcgacgaagccgccggtgtcccggtcggtcagcgcgtcctccggatcgcgaca
cacccggcggtgcgctcccgcggactcggctcgcgactgctcgacgagatcgccgacgag
ttcgcagacgcggtcgactggctcggcgtcgggtacggtgcgacgcccgaactcgtcgac
ttctgggcggacagcggctaccggagcgtccactgctcgacgacgcgcaacgaccggagc
ggggagtactcggcgatcatgctccggccctgctcgacggcgggggaggcactggccgac
cgccacgcctcgtggttccgcgaccggatcgccggcgtcctctcggacccgctcgacgac
ctcgatcccgacgtggcccgcaccgtgctccgcgctgtcgacgggacgcccgagatcgac
ctctcggaaccagaacgcaggctcgtcgcgggcatccccggcggtgcgggggtcttcgac
accgcgcccgagccggttcgtcgactcgcgctcgcccacctcgtcgcgcccgccgaaccc
gacgcgctcaccgacgaccaggaacgactcctcgtccggaaggcgctacagggccacgac
tgggaccgcgtcgccgacgaactgggattcgtctcgacggccgagtgtatgcgcgcgctg
ggccggaccgtcgaaagattggtacggctgtacggcgacgatgcactcacggaggaactc
gaccgccacacatga
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