Halomicrobium sp. LC1Hm: LC1Hm_2026
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Entry
LC1Hm_2026 CDS
T06261
Symbol
sua7-6
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LC1Hm_2026 (sua7-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hall03021
]
LC1Hm_2026 (sua7-6)
Transcription machinery [BR:
hall03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LC1Hm_2026 (sua7-6)
Prokaryotic type
Archaeal type
TFB
LC1Hm_2026 (sua7-6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF5816
Cyclin_N
Sigma70_r4
Cyclin_C
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
QGA83063
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Position
1867300..1868403
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AA seq
367 aa
AA seq
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MDSHEGKLKRDPCKEALSCHIPSSKPVLLSALIATSQTFICLNCFSIKGHMERPTRQREH
DGTQEQETEESEQTCPECDSTAISTDGSGELICEDCGLVIEDENIDRGPEWRAFNHSERQ
SKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQERIRTKDAGER
NLQFALSEIDRMASALGVPRSVREVASVIYRRALDEDLIRGRSIEGVATSCLYAACRQEG
IPRSLEEVSDVSRVEQKEIGRTYRYVAQELKLKMEPVDPKQYVPRFASELELSEEVQSKA
NEIIDVTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQ
IEAMGIH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggattcacacgaggggaagctgaaacgagatccgtgcaaagaggcgctgagctgtcac
attccgtcgagtaagcccgtgttactatcggcactgatcgccaccagccaaacgtttata
tgtctgaattgtttctccataaaaggacacatggagcgccccacccgccagcgcgagcac
gacgggacgcaggagcaggaaacggaagaatccgagcagacctgtcctgagtgtgactcg
acggcaatatcgacggacgggagcggcgaactcatctgcgaagactgcggacttgtcatc
gaagatgagaacatcgaccgcggcccggaatggcgcgcgttcaaccattctgaacggcag
agcaagtcccgcgtcggggcaccgacgacccagacgatgcacgacaaggggctgacgacg
acgatcgactggaaggacaaggacgcgtacggccggtccatctcgtcgaagaagcgatcc
cagatgcaccggctgcgaaagtggcaagagcgaattcggacgaaggacgcgggggagcgc
aacctccagttcgccctctcggagatcgatcggatggcgtcggcactgggcgtcccgcgc
tcggtgcgggaagtcgcgtcggtgatctaccggcgcgcgctggacgaggacctcatccgc
ggccgctccatcgagggcgtcgcgacctcctgtctgtacgccgcctgccgacaggagggc
atcccacggagcctcgaagaggtctcggacgtctctcgggtcgagcaaaaggagatcggg
cgcacgtaccgctacgtcgcccaggagctcaagctcaagatggagcccgtcgaccccaaa
cagtacgtcccgcgcttcgccagcgaactcgaactcagcgaggaggtccagtcgaaggcc
aacgagatcatcgacgtgaccgccgagcagggcctgctgtcgggcaagtcccccacgggc
tacgccgcggcggcgatctacgccgcgtcgctgctgtgcaacgagaagaagacccagcga
gaggtcgccgacgttgcccaggtgacggaagtgacgatccggaaccgctaccaggaacag
atcgaagcgatggggatccactga
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