Halomicrobium sp. LC1Hm: LC1Hm_2113
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Entry
LC1Hm_2113 CDS
T06261
Symbol
rbcL
Name
(GenBank) Ribulose 1,5-bisphosphate carboxylase, large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00630
Glyoxylate and dicarboxylate metabolism
hall00710
Carbon fixation by Calvin cycle
hall01100
Metabolic pathways
hall01110
Biosynthesis of secondary metabolites
hall01120
Microbial metabolism in diverse environments
hall01200
Carbon metabolism
Module
hall_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LC1Hm_2113 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
LC1Hm_2113 (rbcL)
Enzymes [BR:
hall01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
LC1Hm_2113 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QGA83149
UniProt:
A0A5Q0UQW0
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Position
complement(1955901..1957172)
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AA seq
423 aa
AA seq
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MVGITYEDFLDLSYDPADSDLVCEFYVEPAADQDAESAASRVASESSNGTWAELQVEGGV
TDLSATACAVEAATAADRDGYRVTVAYPDALFEGGNMPQILSCIAGNILGMKAVDRIRLL
DCAWPEPLATSFAGPQFGTSVRSEIFDADDRPITATVPKPKVGLSTDQHAQIGYEAWTGG
LDLLKDDENLTDQAFNPFEDRLTESLAQRDRAEDETGEKKSYLLNVTAGGTEMLERVDMA
AEHGCEYVMVDVVTCGWAAVQQARERCERHGLAIHAHRAMHAAFDRLPSHGVSMRVLAQI
ARLCGVDQIHTGTADLGKLANEDTVGINEWLTGDLYGLDDVLPMASGGLHPGLVPELVDR
CGTNIGIQAGGGVHGHPDGTHAGAKALRAAVEAAAEGRSIEAAADDEPALATALDKWGTD
TPR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggttggcataacctacgaagacttcctcgacctgtcctacgacccggccgactccgat
ctcgtctgcgagttctacgtcgaacccgccgccgaccaggacgcggagtcggcggccagc
cgggtcgccagcgagtcctccaacggcacctgggcggaactccaggtcgaagggggcgtc
accgacctctcggcgacggcctgtgccgtcgaggcggccacggcggccgatcgggacggc
taccgcgtgaccgtcgcctatcccgacgcgctgttcgagggcgggaacatgccccagatc
ctctcctgtatcgccggcaacatcctcgggatgaaggccgtcgaccggatccgcctgtta
gactgtgcgtggcccgagccgctggcgacgagcttcgcgggcccgcagttcgggaccagc
gtccgctcggagatcttcgacgccgacgaccggccgatcaccgcgacggtcccgaagccg
aaagtcgggctctcgactgaccagcacgcccagatcggttacgaggcctggaccggcggg
ctcgacctcctgaaagacgacgagaacctcaccgatcaggcgttcaaccccttcgaggac
cgactcaccgagagtcttgcccagcgcgatcgcgccgaagacgagaccggcgagaaaaag
agctacctgctcaacgtcaccgctggcggcaccgagatgctcgaacgcgtcgacatggcc
gccgaacacggctgtgagtacgtcatggtcgacgtcgtcacctgcgggtgggcggccgtc
cagcaggcccgcgaacgctgcgagcgccacgggctggcgatccacgcccaccgcgcgatg
cacgcggccttcgatcgcctcccgtcccacggggtctccatgcgggtgctcgctcagatc
gcacgcctctgtggcgtcgaccagatccacaccggcaccgcggacctgggcaagctcgcg
aacgaggacaccgtcgggatcaacgagtggctcacgggcgacctgtacgggctcgacgac
gtgttgccgatggcctccgggggactgcatcccggcctcgttccagaactggtcgatcgc
tgcgggacgaacatcgggatccaggcgggcggcggcgtccacggccaccccgacggaacc
cacgcgggtgcgaaagccctccgtgcggccgtcgaagccgctgccgagggtcgatcgatc
gaggccgccgccgacgacgagcccgcgctggcgacggccctcgacaagtggggcaccgat
acgccccggtag
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