KEGG   Halomicrobium sp. LC1Hm: LC1Hm_2126
Entry
LC1Hm_2126        CDS       T06261                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03030  DNA replication
hall03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LC1Hm_2126
   03410 Base excision repair
    LC1Hm_2126
   03450 Non-homologous end-joining
    LC1Hm_2126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hall03032]
    LC1Hm_2126
   03400 DNA repair and recombination proteins [BR:hall03400]
    LC1Hm_2126
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hall04147]
    LC1Hm_2126
DNA replication proteins [BR:hall03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LC1Hm_2126
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LC1Hm_2126
DNA repair and recombination proteins [BR:hall03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LC1Hm_2126
Exosome [BR:hall04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LC1Hm_2126
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: QGA83162
UniProt: A0A5Q0UN90
LinkDB
Position
complement(1969358..1970338)
AA seq 326 aa
MGNADLRSLASLEDVPFEELSDSVVAVDAHNWLYRYLTTTVRFTSDEKYTTSDGTEVANL
IGVVQGLPKFFEHDLTPVFVFDGGVTELKDDEVEQRREAREKREEKLEAARERGDTSEIA
RLDSQTQRLTDTILTTTRQVLRTLDVPVVDAPAEGEAQAAHMARQDAVDYVGTEDYDALL
LGAPLTLRQLTSSGDPELMDFQATLDHHGITWEQLVDAAILMGTDFNPGIDGIGPKTAIK
LVKEHGDLWGALDARDAHVEHGDRIRAMFLDPTVTDDYELDLAVNPDLDAAREYVTGEWE
VDADEVARAFERIEESVVQTGLDNWT
NT seq 981 nt   +upstreamnt  +downstreamnt
atgggaaacgcagacctacgatcgctggcgtcgctcgaagacgttcccttcgaggagctg
agtgacagcgtcgtcgccgtcgacgcccacaactggctctaccggtatctgacgaccacg
gtccggttcaccagcgacgagaagtacaccaccagcgacgggacggaggtggcgaacctg
atcggcgtcgtccaggggctcccgaagttcttcgaacacgacctgacgccggtcttcgtc
ttcgacggcggcgtcacggaactcaaagacgacgaggtcgagcaacggcgcgaggcccgc
gagaagcgcgaggaaaaactcgaagccgccagagagcgcggcgacacgagcgagatcgcc
cgactcgactcccagacacagcgcctgaccgacacgatcctgacgacgacccgtcaagtc
ctccggaccctcgacgtgccggtcgtcgacgcgcccgcagagggcgaggcacaggccgcc
cacatggcccggcaggacgccgtcgactacgtcggtaccgaagactacgacgcgctcttg
ctcggtgcgccgctgacgctgcgccagctcaccagcagcggcgacccggagctgatggat
ttccaggcgacgctggaccaccacggaatcacctgggagcaactggtcgacgccgcgatc
ctgatggggacggacttcaaccccggcatcgacgggatcgggccgaagacggccatcaaa
ctcgtcaaagagcacggcgacctctggggcgcactcgacgcccgcgacgcacacgtcgaa
cacggcgaccgcatccgcgcgatgttcctcgacccgaccgtcactgacgactacgaactc
gatctggcggtgaaccccgacctcgacgccgcccgcgagtacgtcaccggcgagtgggaa
gtcgacgccgacgaggtcgcacgcgccttcgagcgcatcgaggagagcgtcgtccagacc
gggctggacaactggacctag

DBGET integrated database retrieval system