KEGG   Halomicrobium sp. LC1Hm: LC1Hm_2184
Entry
LC1Hm_2184        CDS       T06261                                 
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
  KO
K07464  CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
Organism
hall  Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:hall00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hall02048]
    LC1Hm_2184 (cas4)
Enzymes [BR:hall01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.12  Exodeoxyribonucleases producing 3'-phosphomonoesters
    3.1.12.1  5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
     LC1Hm_2184 (cas4)
Prokaryotic defense system [BR:hall02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    LC1Hm_2184 (cas4)
   Subtype I-B factors
    LC1Hm_2184 (cas4)
   Subtype I-C factors
    LC1Hm_2184 (cas4)
   Subtype I-D factors
    LC1Hm_2184 (cas4)
  Type II CRISPR-Cas system
   Subtype II-B factors
    LC1Hm_2184 (cas4)
SSDB
Motif
Pfam: Cas_Cas4 PDDEXK_1
Other DBs
NCBI-ProteinID: QGA83220
UniProt: A0A5Q0UQ90
LinkDB
Position
2020456..2021016
AA seq 186 aa
MTESSTDPVDRFLAAARDETEELPFRLTGVMFQYYVVCERELWFLSRDVEIDRDTPAIVR
GSDVDDSAYADKRRDVRVDGIIAIDVLDSGAILEVKPSSSMTEPARLQLLFYLWYLDRVT
GVEKTGVLAHPTEKRRETVELTPETSAEVESAIRGIRDVVSADSPPPAAEKPVCDSCAYH
DFCWSC
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaccgagtcgtcgaccgaccccgtcgaccggtttctcgccgcagccagagacgagacc
gaagagttgcccttccgactcacgggcgtgatgttccagtactacgtcgtctgtgagcgg
gaactctggtttctcagccgcgacgtggagatcgatcgcgacacaccggcaatcgtccgc
gggagcgacgtcgacgactcggcgtacgccgacaagcgccgggacgtgcgcgtcgacggc
atcatcgccatcgacgtgctcgacagcggtgcgattctggaggtcaaaccctcctcgtcg
atgaccgaaccggcccggctgcagctgttgttttacctctggtacctcgatcgggtcacc
ggcgtcgaaaagaccggcgtgctcgcacaccccacggaaaagcgccgcgagaccgtcgaa
ttaacgccggagacgagcgccgaagtcgaatcggcgatccgtggcatccgcgacgtcgtc
agcgcagactccccaccaccggcagcggagaagccggtctgtgactcctgtgcctatcac
gacttctgctggagctgttga

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