Halomicrobium sp. LC1Hm: LC1Hm_2248
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Entry
LC1Hm_2248 CDS
T06261
Symbol
sbcC
Name
(GenBank) ATPase involved in DNA repair, SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_2248 (sbcC)
DNA repair and recombination proteins [BR:
hall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC1Hm_2248 (sbcC)
Archaeal homologous recombinant proteins
LC1Hm_2248 (sbcC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_13
AAA_29
AAA_21
AAA_27
NET2A
Seryl_tRNA_N
IFT57
Spectrin_Anc-1
MukB
DUF5795
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QGA83283
UniProt:
A0A5Q0UNQ4
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Position
complement(2083072..2085747)
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AA seq
891 aa
AA seq
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MRISRVRMENFKCYGEADLRLDRGVTIIHGLNGSGKSSLLEACFFALYGTKALDENLGEI
VSIGADDATVELWFTHGGGDFHIERRVRATGERATTAKCVLETPEGSFDGARAVRRRVTE
LLRMDSEAFVNCAYVRQGEVNKLINASPGQRQDMLDDLLQLGKLEEYRERASDARVGIGR
VRDDKQGALGQLEEQIAEKEERDLYDRLNELRSQIAETSEEIERIEGQRERAVQTRDDAQ
SIIDDYEEKQAELDELEAEIDELRETIAETERERDEIDERIRDRKETLSERETELREAVA
ESDLDSADSDAVSERIDELTARDDELRDRIEAQRVAASEHGSEAESLRESAATLDERATE
KREEAERLEAEVADTREDVRERRDQLDEIDERIETLAARFEDAPVDRDGVEDHRDEVAST
LEDARQRVTELETTLEAERERVAEAQQLLDAGKCPECGQDVTDSPHVEKIDERRDRIEEH
ERDLEAAREAVTTREERLERAEQLVETAAEIETLETRRDDVTRLIEDRESGLDEEEDRID
ELRADAEALASEADEKREAATEAEQAAQECRDVVADCNQQRQECKTELERLERIETLLAA
VEECEDDLERLREQRQQKDEINDERRERLADKRERTSTLEAEFDDANVEEARAERERATE
YIQQADEKLDELRAERDDLQASAGAVENEIEALEELRERRDELAATVEKLATLYEEAEEL
ESMYGTVRAELRQRNVETLERMLNDVFDLVYQNDSYSHIELDGEYQLTVYQKDGEALDPE
QLSGGERALFNLSLRCAIYRLLAEGIEGAAPMPPLILDEPTVFLDSGHVSQLLGLIEFMR
DDVGVEQIVVVSHDEELVGAADALVRVEKDSTTNRSTAQRVEAGVVADAAD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctctcgggtccggatggagaacttcaagtgttacggcgaggccgacctgcga
ctcgaccgcggcgtgacgatcatccacggcctcaacggcagcgggaagtcctcgctgctg
gaggcctgtttcttcgcgctctacgggaccaaggccctcgacgagaacctcggcgagatc
gtctcgatcggggccgacgacgcgaccgtcgagctgtggttcacccacggcggcggcgac
ttccacatcgagcgccgcgtccgggcgacgggcgagcgagcgacgaccgccaagtgcgtc
ctcgaaacgccggaggggagcttcgacggcgctcgcgccgtccgccgccgcgtcaccgaa
ctcctccggatggacagcgaggcgttcgtcaactgtgcgtacgtcaggcagggcgaggtc
aacaagctgatcaacgcctcgccgggccagcgccaggacatgctcgacgacctcctccag
ctcgggaagctagaggagtaccgcgagcgggcaagcgacgcccgcgtcggcatcggccgc
gtccgcgacgacaaacagggcgcgctgggccagctcgaagagcagatcgccgagaaggag
gagcgtgacctctacgatcgcctcaacgaactccggagccagatcgccgagaccagcgag
gagatcgaacgcatcgaaggccagcgcgagcgggcagtccagacccgcgacgacgcccag
tcgatcatcgacgactacgaggagaaacaggccgagctcgacgaactcgaagccgagatc
gacgagctccgggagacgatcgcagagaccgaacgggagcgagacgagatcgacgagcgg
attcgggaccgaaaggagacgctgagcgagcgcgagacggaactgcgcgaggccgtcgcc
gagagcgacctcgacagcgccgactccgacgccgtctccgagcggatcgacgaactgacc
gcccgcgacgacgagctgcgagaccgaatcgaagcccagcgggtcgcggcctcggaacac
ggcagcgaggccgagtcgctgcgcgagagcgccgcgactctcgacgagcgagccaccgag
aaacgcgaggaggccgagcgactcgaagccgaggtggccgacacccgcgaggacgtacgg
gaacggcgcgaccagctcgacgagatcgacgagcgaatcgagacactcgcggcccgcttc
gaggacgcaccggtggatcgggacggcgtcgaagaccaccgcgacgaggtcgcgtcgacg
ctcgaagacgcacgccagcgggtcacggaactggagacgacgctcgaagccgaacgcgag
cgcgtcgccgaggcccagcagcttctcgacgctgggaagtgtccggagtgcgggcaggac
gtgacagactcgcctcacgtcgagaagatcgacgaacggcgcgaccgaatcgaggaacac
gagcgtgacctcgaagcggcccgagaggcggtgacgacccgcgaggagcgactcgaacga
gccgagcagctcgtcgagacggccgccgagatcgagaccctggagacgagacgcgacgac
gtcacgcgcttgatcgaggaccgcgagtcggggctcgacgaggaggaagaccggatcgac
gaactccgggccgacgccgaggcgttggcgtcggaggccgacgagaagcgcgaggcggcc
accgaggccgagcaagcggcccaggagtgtcgcgacgtcgtcgccgactgcaatcaacag
cgccaggagtgcaagacggagctggaacggctcgaacgcatcgagacgctgctcgcggcg
gtcgaggagtgcgaagacgacctcgaacgactgcgcgagcagcgccagcagaaagacgag
atcaacgacgagcgccgcgagcgactcgccgacaagcgagagcgcacgtccactctcgaa
gcggagttcgacgacgcgaacgtcgaggaggcccgcgcggaacgcgagcgggcgacggag
tacatccagcaggcagacgagaaactcgacgaactccgggccgaacgcgacgacctacag
gcgagcgctggggccgtcgaaaacgagatcgaagccctggaggagctccgtgagcgccgc
gacgaactggcggcgaccgtcgagaagctcgcgacgctgtacgaggaggccgaggagctg
gagtcgatgtacggcaccgtccgggccgagctgcgccagcgcaacgtcgagacgctcgaa
cggatgctcaacgacgtgttcgatctggtctaccagaacgactcgtactctcacatcgaa
ctcgacggggagtaccagctgacggtgtaccagaaagacggcgaggcgctcgatcccgag
cagctctccgggggcgagcgcgcgctgttcaacctcagcctccggtgtgcgatctaccga
ctgctggccgagggaatcgagggggctgcgccgatgccgcccctgatcctcgacgagccg
accgtctttctcgactccgggcacgtctcacagctgctcggcctgatcgagttcatgcgt
gacgacgtgggcgtcgagcagatcgtcgtcgtcagccacgacgaggaactcgtcggcgcg
gccgacgcgctggtccgcgtcgagaaggactcgacgaccaaccgctcgacggcacagcgg
gtcgaggcgggcgtcgtcgcggacgccgccgactag
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