KEGG   Halomicrobium sp. LC1Hm: LC1Hm_2252
Entry
LC1Hm_2252        CDS       T06261                                 
Symbol
rpt1-2
Name
(GenBank) ATP-dependent 26S proteasome regulatory subunit
  KO
K03420  proteasome regulatory subunit
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03050  Proteasome
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    LC1Hm_2252 (rpt1-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:hall03051]
    LC1Hm_2252 (rpt1-2)
Proteasome [BR:hall03051]
 Prokaryotic proteasome
  Archaeal regulatory particles
   LC1Hm_2252 (rpt1-2)
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_2 AAA_16 RuvB_N AAA_5 AAA_22 AAA_17 GrpE NPHP3_N TIP49 Prot_ATP_ID_OB_C DUF815 AAA_14 nSTAND3 AAA_33 AAA_11 NTPase_1 Mg_chelatase AAA_28 AAA_3 NACHT Sigma54_activat DUF2334 IstB_IS21 AAA_7 TsaE NB-ARC RNA_helicase CPT APG6_N Torsin PhyR_sigma2 DUF6393 Parvo_NS1 AAA_30 AAA_18 ABC_tran ATP-synt_ab DUF5906 ADIP SHE3 LRRFIP bZIP_1 CCDC22_CC AAA_24 PUMA_CC ATG14 Sigma54_activ_2 COG4_N DUF724 Takusan COG6_N
Other DBs
NCBI-ProteinID: QGA83287
UniProt: A0A5Q0UNV5
LinkDB
Position
2087936..2089150
AA seq 404 aa
MTDTVDEVDLPYDDDASQQEKIEALQERLEVLEDQNEEMRDKLLDANAENNKYQQKLERL
THENKKLKQSPLFVATVQELTDEGVVIKQHGNNQEALTEVTDEMRDGLEPDSRVAVNNSL
SIVKRLDDETDVRARVMQVDQSPDVTYADIGGIEEQMEEVRETVELPLKSPEMFEDVGID
PPSGVLLHGPPGTGKTMLAKAVANQTDATFIKMAGSELVHKFIGEGSKLVRDLFELARNE
EPAVVFIDEIDAIAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGEIRLIAATNRFDML
DRAILRPGRFDRLIEVPKPDYEGRKQIFQIHTRGMNVADDVDFERLAGDIDEASGADVKA
ICTEAGMFAIRDDRTEVRMQDFTDAWEKIESEESDDQDVSPTYA
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaccgacaccgtcgacgaggtcgatctgccgtacgacgacgacgcgtcccagcaggag
aaaatcgaggcgttacaggagcgtctcgaagtgctggaggatcaaaacgaggagatgcgc
gacaagctgctggacgccaacgccgagaacaacaagtaccagcagaagctcgaacggctc
acccacgagaacaagaagctcaagcagtcgccgctgttcgtcgccaccgtccaggagctg
accgacgagggcgtcgtcatcaagcaacacggcaacaaccaggaggccctgaccgaggtc
accgacgagatgcgcgacggcctcgaaccggactcccgcgtcgccgtcaacaactccctg
tcgatcgtcaaacggctcgacgacgagaccgacgtgcgggctcgcgtgatgcaggtcgac
cagagccccgacgtgacctacgccgacatcggcgggatcgaagagcagatggaggaggtc
cgcgagacggtcgaactcccgctcaagtcccccgagatgttcgaggacgtggggatcgat
ccaccgtccggcgtcctcctgcacggcccgcccggcaccgggaagacgatgctggccaaa
gccgtcgccaaccagactgacgccacgttcatcaagatggccggctccgagctggtccac
aagttcatcggcgaggggtcgaagctggtgcgggacctgttcgaactcgcgcgcaacgag
gagcccgccgtcgtcttcatcgacgagatcgacgccatcgcggccaagcggacggactcg
aagacctccggcgacgccgaggtccagcggacgatgatgcagctgctcagcgagatggac
ggcttcgacgagcgcggcgagatccgactcatcgctgccaccaaccgcttcgacatgctc
gaccgcgcgatcctccggcccggccgcttcgaccgcctcatcgaagtccccaagcccgac
tacgagggtcgcaaacagatcttccagatccacacccgcggcatgaacgtcgccgacgac
gtggacttcgagcgactcgcgggagacatcgacgaggcgtcgggtgccgacgtgaaggcg
atctgtacggaagcggggatgttcgccatccgtgacgatcgcaccgaagtccggatgcag
gacttcaccgacgcctgggagaaaatcgagtccgaagagagcgacgaccaggacgtgtcg
ccgacctacgcctga

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