Halomicrobium sp. LC1Hm: LC1Hm_2312
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Entry
LC1Hm_2312 CDS
T06261
Symbol
ercC2
Name
(GenBank) DNA excision repair protein ERCC-2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03022
Basal transcription factors
hall03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LC1Hm_2312 (ercC2)
09124 Replication and repair
03420 Nucleotide excision repair
LC1Hm_2312 (ercC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hall03021
]
LC1Hm_2312 (ercC2)
03036 Chromosome and associated proteins [BR:
hall03036
]
LC1Hm_2312 (ercC2)
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_2312 (ercC2)
Enzymes [BR:
hall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LC1Hm_2312 (ercC2)
Transcription machinery [BR:
hall03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LC1Hm_2312 (ercC2)
Chromosome and associated proteins [BR:
hall03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LC1Hm_2312 (ercC2)
DNA repair and recombination proteins [BR:
hall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LC1Hm_2312 (ercC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
zf_Rg
AAA_19
AAA_30
SLFN-g3_helicase
nSTAND3
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QGA83346
UniProt:
A0A5Q0UP32
LinkDB
All DBs
Position
complement(2142139..2144562)
Genome browser
AA seq
807 aa
AA seq
DB search
MGDSAADERGWEEYFAFDEPYANQGDAIERAIEAGQARGYLAMEGPCGTGKTMAALTAGA
HLLDAGHYERIVVVTPVKQQLQQFVTDLRAMNAGLDEPLRGISLVGKRDLCPYGREGVFP
EDSSVHDRCEDLRENTARLVEAEGDGTDHAPASAAIEAELGDDEQWWDPQIASDLAAAAR
PDASDQQRLGEGTLGTAGADSPYRPSQPAAPDEIAESDDPPLYCPFEADWYARNTGSPID
FGVGEHSVVTAEEYLPASVEYGTCPHRAMSVLLEAADVVIGNYNHLFDPQTRPLLASILD
EDTFVVVDEAHRLEERVRDLLSDRVGRQTLTQASNDLNFLLQRARQTDDHRQQVEEVLAA
REVPLAAVEQAQQFYDDVLDWLDDRVRSYLDGEFEGWRTDPDQLPQRDHEIPLRDPETVE
PDALTEWAQREGYDGGLWRSLPKIGAAVEEAIDTLGLARTPVCAAVGTIAGQWWERDHAG
FLREIELEHAPADERHVDADYEVAYTAGLLCYNCMPSTALRNVFDDLGGGVLMSATLEPL
DVFQHVSGLSFLRDGGPDRDPRFVKAATYGLTFPPDNRASYLVDCRPFTARNRGEPASMR
PLGDAWNPTRDEYAHALRALARSPGNVLVAMPNYREAAWAGAYLDDAVDKPVLVDESSSN
DATNRLKQRFYDGPGKVLVTSARGTLTEGVDYDGEKLSTCAVVGIPLVNIGSPRVRGVKR
AYGDAFGDDVAFEYALTVPAVRRARQAIGRVIRGAEEVGVRAFVGRRYCPEARHSVYEFL
PENEREEFTQLTPEFLADQLDRFWDRP
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgggagactcggcggccgacgagcgtggctgggaggagtacttcgcgttcgacgagccg
tacgcgaaccagggcgacgccatcgagcgcgcgatcgaggccggccaggcgcggggctac
ctcgcgatggagggcccctgtggcaccggcaagacgatggcggccctgacggccggcgca
cacctgctcgacgccggccactacgagcggatcgtcgtcgtgacgccggtcaaacagcaa
ctccagcagttcgtcaccgacctgcgcgcgatgaacgccggactggacgagccactgcgt
ggcatctcgctggtcggcaagcgcgacctctgtccgtacgggcgcgaaggtgtcttcccc
gaggacagctccgtccacgaccgctgtgaagacctgcgcgagaacacggcacggctcgtc
gaggccgagggcgacggcaccgaccacgcgccggccagcgccgccatcgaggcggaactg
ggtgacgacgagcagtggtgggacccacagatcgccagcgacctcgcggcggcggcccga
ccggacgccagcgaccagcagcgcctcggcgagggcaccctggggaccgccggtgccgac
tccccgtaccgccccagccagcccgccgcgcccgatgagatcgccgagagcgacgacccg
ccgctgtactgtccgttcgaggccgactggtacgcccgcaacaccggctcgccgatcgac
ttcggcgtcggggaacacagcgtcgtcacggccgaggagtacctccccgcgtcggtggag
tacgggacctgtccacaccgcgcgatgagcgtcctgctggaggctgccgacgtggtgatc
ggcaactacaaccacctgttcgacccacagacccgtccgctgctcgcctcgatcctcgac
gaggacacgttcgtggtcgtcgacgaggcccaccggctcgaagagcgcgtccgggacctg
ctctcggatcgcgtcgggagacagacgctcacacaggccagcaacgacctcaacttcctg
ctccagcgggctcgccagaccgacgaccaccgacagcaagtcgaggaggtgctcgccgca
cgcgaggtcccgctggcggccgtcgagcaggcccagcagttctacgacgacgtgctcgac
tggctcgacgaccgggttcggtcctacctcgacggcgagttcgaggggtggcgcaccgac
cccgaccagctcccccagcgcgaccacgagattccgctgcgagatccggagaccgtcgaa
ccggacgccctgaccgagtgggcccagcgcgaggggtacgacggcggtctgtggcgctcg
ctcccgaagatcggcgcggcggtcgaagaggccatcgacacgctggggctcgcacggacg
ccggtctgtgcggccgtcgggacgatcgcgggccagtggtgggagcgcgaccacgccggc
ttcctccgcgagatcgaactggaacacgcacccgccgacgagcgccacgtcgacgccgac
tacgaagtcgcgtacaccgccgggctgctgtgttacaactgcatgccctcgacggcgctt
cgcaacgtcttcgacgacctgggcgggggcgtcctgatgagtgcgacgctcgaaccgctg
gacgtgtttcagcacgtctccgggctctctttcctccgtgacggcggcccggaccgggac
cctcgcttcgtcaaggccgcgacctacgggctgacctttcccccggacaatcgcgcgtcg
tatctcgtggattgtcgtcccttcacggcccgcaaccgcggcgagcccgcgtcgatgcga
ccgcttggcgatgcctggaacccgacccgcgacgagtacgctcacgccttgcgagccctg
gcgcgctcgccgggcaacgtcctcgtggcgatgccgaactaccgggaggccgcgtgggcc
ggcgcgtacctcgacgacgccgtcgacaagccggtcctcgtcgacgagtcgtccagcaac
gacgcgacgaaccgcctcaagcagcgcttctacgacgggccgggcaaggtgctcgtcacc
agcgcacggggcacgctcaccgagggggtcgactacgacggcgagaagctctcgacctgt
gccgtcgtcggcatcccactggtcaacatcggctcgccgcgggtccggggtgtcaagcgg
gcctacggcgacgccttcggcgacgacgtggccttcgagtacgccctgaccgtgcccgcg
gtccggcgcgcccgccaggccatcggacgggtgatccgcggggccgaggaggtcggcgtc
cgggcgttcgtcggccggcgctactgtcccgaggcacgccactccgtctacgagttcctg
ccggagaacgaacgcgaggagttcacgcagctgaccccggagttcctggccgaccagctc
gaccgcttctgggaccgcccgtag
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