Halomicrobium sp. LC1Hm: LC1Hm_2385
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Entry
LC1Hm_2385 CDS
T06261
Symbol
sua7-7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LC1Hm_2385 (sua7-7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hall03021
]
LC1Hm_2385 (sua7-7)
Transcription machinery [BR:
hall03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
LC1Hm_2385 (sua7-7)
Prokaryotic type
Archaeal type
TFB
LC1Hm_2385 (sua7-7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Zn_ribbon_LysW
Cas12f1-like_TNB
DUF5817
DZR_2
Auto_anti-p27
HTH_Tnp_ISL3
Anti-TRAP
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QGA83419
LinkDB
All DBs
Position
complement(2209024..2210007)
Genome browser
AA seq
327 aa
AA seq
DB search
MSDSNTRTRARARTTTDEEQTEEESETTSTACPECAGTLVVDDEHGETVCEDCGLVVETD
EIDRGPEWRAFDSSEKDEKSRVGAPTTNMMHDKGLSTNIDWRDKDAYGNSLSGKQRQKMQ
RLRKWNERFRTRDSKERNLKQALGEIDRMASAVGLPENVRETASVIYRRALDENLLPGRS
IEGVSTASVYAAARQAGVPRSLDEIDEVSRVEKSEIARTYRYVVRELGLEVAPADPESYV
PRFASSLELSDEAEHRARQLLQNAKEQGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVS
EVADISEVTIRNRYHELLEAEQGLPMA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcgaacaccagaacgcgagcgagagcgcgcacgaccaccgacgaggaacag
acagaagaagagagcgagacgacatcgaccgcgtgtccggagtgtgcgggcacgctggtc
gtcgacgacgaacacggcgagaccgtctgtgaggactgtggactcgtcgtcgagaccgac
gagatcgaccgcggaccggagtggcgcgcgttcgactccagcgagaaagacgagaagtcc
cgcgtcggcgcaccgacgaccaacatgatgcacgacaaggggctgtcgaccaacatcgac
tggcgcgacaaggacgcctacggcaactcgctgtcgggcaagcagcgccagaagatgcag
cgcctgcgcaagtggaacgagcggttccgcacccgtgactccaaggagcgcaacctcaag
caggcgctgggcgagatcgaccggatggcctccgccgtcggcctcccggagaacgtccgc
gagaccgcgagtgtcatctaccgccgtgcgctcgacgagaacctcctgcccggccgctcc
atcgagggcgtctcgacggcctccgtctacgccgccgctcgtcaggccggcgtcccccgg
agcctcgacgagatcgacgaggtctcccgcgtcgagaagagcgagatcgcacgcacgtac
cgctacgtcgtccgggaactcgggctcgaagtcgcgccggccgaccccgagagctacgtc
ccgcgctttgcctcctcgctggagctgtcggacgaggccgaacaccgcgcccgtcagctg
ctccagaacgccaaagagcagggcgtccactccggcaagtccccggtcggactggccgcc
gcggccgtgtacgccgccgcactgctgaccaacgagaagacgacccaggccgccgtcagc
gaggtcgccgacatctccgaagtgacgatccgcaaccgctaccacgagctgctggaggcc
gagcagggcctcccgatggcctga
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