Halomicrobium sp. LC1Hm: LC1Hm_2483
Help
Entry
LC1Hm_2483 CDS
T06261
Name
(GenBank) Transposable element, IS605 OrfB family
KO
K07496
putative transposase
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC1Hm_2483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
C1_2
GvpH
Ribosomal_L37ae
Motif
Other DBs
NCBI-ProteinID:
QGA83517
LinkDB
All DBs
Position
2313480..2314754
Genome browser
AA seq
424 aa
AA seq
DB search
MAKQVVTRTYTASIRNQQRVSDDLDSLGFAASKLWNVGRWVCDRVWSEIGHIPSHNELTT
YLKSHERYDDLHSQSSQRVLQELAEAFNGWYGKRRNGDTRANPPKYRKHGDDHPRSTVTF
KAAGFKLDTNYERVRLSKGSNLKAYWSDFILCEYQTRPDVDLSTVETVQQVRAVWTGDEW
ELHFVCKVEIEVSEAPGEKTVGVDLGINNFAALAYQDGHSELYPLNCLKQDDYYFSKRLA
QCDDSDSEQATRLNQKNSARRTHYFHTLSKHIVQRCVDEGVGTIVVGDLSGIREDEETDE
SKNWGKHGNLDLHSWAFDRFTSMLAYKAEMDGITVKQVSERDTSKSCSCCGRKRKANRVE
RGLYVCDECETVANADVNGAENIRQKVSPNPHGEDRSNGWLAQPSTFLFDKETGAFAPQE
QITS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaggtcgttacccgcacctacactgcttccattaggaaccagcagcgggtg
tctgacgaccttgattcgctcgggttcgcggcctcgaaactctggaacgtcggacggtgg
gtctgcgaccgagtgtggtctgaaatcggccacattcccagtcacaacgaactcaccacc
tacctgaagtcgcacgaacgctacgatgacctgcattctcagtcaagtcagcgagtcctt
caagaactcgctgaagcgttcaacggctggtacggcaaacgacgcaatggagacacgaga
gccaacccgccgaagtaccgcaaacacggcgacgaccacccccgaagcacggtcacgttc
aaagccgccggcttcaaactcgacaccaactacgagcgagtccgcctcagcaaaggctcg
aacctcaaagcatactggtcggatttcatcctctgcgaataccagactcgtcccgacgtt
gacctctccaccgtcgagaccgtgcaacaggttcgggctgtctggaccggcgacgagtgg
gaactccacttcgtctgcaaagtcgagatcgaggtttctgaagcacccggtgagaagacc
gtgggtgttgacctcggcatcaacaacttcgccgcactcgcctaccaagacggtcacagc
gaactgtacccgctcaactgcttgaagcaggacgactactacttcagcaagcgactcgcc
caatgtgacgattctgactccgagcaagccacgcggttgaaccagaagaactcggctcgt
cgcactcactacttccacacgctctcgaaacacatcgttcagcgatgtgtggacgaaggt
gttggtacgatcgtggttggcgacctctccggcatccgtgaggatgaggagaccgacgag
tcgaaaaactgggggaaacacggcaatctcgacctgcattcgtgggcgttcgaccgcttc
acttcgatgcttgcgtacaaagccgagatggacggcatcacggtcaagcaagtgtctgag
cgggacacgtcgaagtcgtgttcgtgttgtggtcggaagcggaaggcgaaccgcgtggag
cgtgggttgtacgtctgtgatgagtgtgagacggtggcgaacgcggatgtgaacggtgct
gagaacatccggcagaaagtatctccgaatcctcacggagaggataggagtaacggctgg
ttggcacagccatcgacgttcttgtttgacaaggaaactggtgcgttcgcacctcaagaa
cagatcacgtcgtaa
DBGET
integrated database retrieval system
