Halomicrobium sp. LC1Hm: LC1Hm_2556
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Entry
LC1Hm_2556 CDS
T06261
Symbol
salY2
Name
(GenBank) ABC-type antimicrobial peptide transport system, permease component
KO
K02004
putative ABC transport system permease protein
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hall02000
]
LC1Hm_2556 (salY2)
Transporters [BR:
hall02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
LC1Hm_2556 (salY2)
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Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
FtsX
Cyt_bd_oxida_II
DUF7544
DUF6343
Motif
Other DBs
NCBI-ProteinID:
QGA83590
UniProt:
A0A5Q0URC9
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Position
complement(2385397..2386632)
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AA seq
411 aa
AA seq
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MDPRESFTIAARSIRSHKLRSTLTVIGVVIGIASVVTFATFGASVQAEVVGGIADSGANN
VYVLGQPADEEGFQQALQPVFTEYDLDRLAEIDGVEAVVPRGSIPINAVTHRGDTVALQQ
ATATTPEAVTDETLVAGRSFERGANETVLNRAAAEATFAENVTVGDEITVDRGDETWTLT
VVGIVNGTAGELPVGNFGPQPGLYVPADPFYESVVESPNANARLRAYPQATVIADPASTL
AVTDAVETYLQERSDARQLAPDGVELAARTSGDFAEQISDVIDQITRFVTGIAVIALVVG
AIGIANIMLVSVTERTREIGIMKAVGARNRDVMELFLLEATLLGAGGALLGLPLGLAVAW
GGTRYAEVGFAFAPFWSALAVLVGVLVGVVAGLYPAWRAARVDPIDALRYE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgcgagtcgttcacgatcgcggcccgctcgatccgctcgcacaagctgcgc
tcgacgctgacggtgatcggcgtcgtcatcggcatcgcctcggtcgtcaccttcgcgacc
ttcggcgcgagcgtccaggccgaggtcgtcggcgggatcgccgactcgggggcgaacaac
gtctacgtgctcggccagcccgccgacgaagaggggttccagcaggcgctccagcccgtg
ttcaccgagtacgacctcgaccgcctcgcggagatcgacggcgtcgaggcggtcgtcccg
cgggggtcgatcccgatcaacgcggtgacccatcgaggcgacacggtggcgctccagcag
gcgacggccacgacccccgaggccgtcaccgacgagacgctggtcgccggacggagcttc
gagcgcggtgcgaacgagacggtcctcaaccgcgccgcggccgaggccacgttcgcggag
aacgtcaccgtcggcgacgagatcacggtcgatcgcggcgacgagacgtggacgctgacg
gtcgtcggcatcgtcaacgggaccgccggcgagttgccggtgggcaacttcggtccgcag
ccggggctctacgtcccagccgatcccttctacgagagcgtcgtcgagagtccgaacgcg
aacgctcggctgcgcgcgtacccgcaggcgaccgtcatcgccgatccggcttcgacgctg
gccgtcaccgacgcggtcgagacgtacttacaggagcggtccgacgcccgccagctcgcg
cccgacggcgtcgagctggccgcccggaccagcggagacttcgccgagcagatcagcgac
gtgatcgaccagatcacacgcttcgtcacggggatcgcggtcatcgcgctggtggtgggc
gcgatcggcatcgccaacatcatgctggtcagcgtcaccgagcggacccgcgagatcggg
atcatgaaggccgtcggcgcgcgcaaccgcgacgtgatggagctgttcttgcttgaggcg
acgctgctgggtgccggcggcgcgttgctcggcctcccgctggggctcgcggtcgcctgg
ggcgggacccgatacgccgaggtgggcttcgcgttcgcacccttctggtcggcgctggcc
gtgctggtcggcgtgctggtcggcgtcgtcgcggggctctatccggcgtggcgggccgcc
cgcgtcgacccgatcgacgccctccggtacgagtga
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