Halomicrobium sp. LC1Hm: LC1Hm_2728
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Entry
LC1Hm_2728 CDS
T06261
Name
(GenBank) Sugar-specific transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hall03000
]
LC1Hm_2728
Transcription factors [BR:
hall03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC1Hm_2728
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Gene cluster
GFIT
Motif
Pfam:
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
QGA83760
UniProt:
A0A5Q0URU3
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Position
complement(2561617..2562402)
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AA seq
261 aa
AA seq
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MIGGFIGIWYLLSVMTVDTEVIERDAILDRIRALVDGAASEVALSVPHTALPELEATLSA
AVDRGLLVLVLVWDPPHDERSERELPSLANCSTVARRSEDIAPVFCCVDNERGLIGNGSS
ITGDSPDDVVGTFDFQEVAHGFYRDFVTNFWMFASEIHAADVPDLPATYDGIRQAVTNVA
LCLRDDVAIRCRATGHDPETGAERTVDGRVLNVHQRMVYPASSSLPIENSILVEDDGRHW
IGGPHAVLENLAADRLLLRRA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgataggtggttttatcggcatctggtacctgttgtcagtgatgactgtcgacaccgag
gtgatcgagcgcgacgccatcctcgaccggattcgagccctggtcgacggtgcggcgtcg
gaagtcgctctctcggtgccacacacggcgttgccggagctcgaagcgacgctctcggcg
gccgtcgaccgtgggctgctcgtcctcgtgttggtctgggacccgccacacgacgagcgc
tcggaacgcgaactgccgtcgctggcgaactgttcgacggtcgcacgcagatcggaggac
atcgcgcccgtgttctgctgtgtcgacaacgagcggggcctgatcggcaacggatcgtcg
atcaccggcgacagcccggacgacgtcgtcggcaccttcgacttccaggaggtcgctcac
ggattctaccgggacttcgtcacgaacttctggatgttcgcgtcggagatccacgccgcg
gacgtgcccgacctgcccgcgacgtacgacggcatccgacaggcggtgacgaacgtcgcg
ctgtgtctccgcgacgacgtggcgatccgatgccgcgcgaccggccacgatccggagacc
ggggccgaacgcaccgtcgacggtcgcgtcctgaacgtccaccagcggatggtgtacccc
gcgtcttcctcattgcccatcgagaactcgatcctcgtcgaagacgacggtcgtcactgg
atcggcggcccccacgccgtcttggagaatctggctgccgaccggctactgctccgacgc
gcgtga
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