KEGG   Halomicrobium sp. LC1Hm: LC1Hm_2847
Entry
LC1Hm_2847        CDS       T06261                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LC1Hm_2847 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hall03400]
    LC1Hm_2847 (uvrA)
DNA repair and recombination proteins [BR:hall03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LC1Hm_2847 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LC1Hm_2847 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 AAA_21 nSTAND1 AAA_23 DnaJ_CXXCXGXG AAA_15 RsgA_GTPase ATPase CA109-like
Other DBs
NCBI-ProteinID: QGA83879
UniProt: A0A5Q0UST4
LinkDB
Position
2667617..2670637
AA seq 1006 aa
MTREYIEVRGAEEHNLKDIDVEIPREELTVVTGLSGSGKSSLAFETVYAEGQRRYIESLS
AYARNFLGQMDKPQVETVEGLSPAISIDQKNAANNPRSTVGTVTELHDYLRLLYARIGTP
HCPECGREVGEQSAQNMVRRMLSLPEGTRAKIAAPVVRDQKGAFEELFEELVGEGYARVE
VDGEPYDLTIDDPELDENYDHTIDVIVDRVSVSADARSRITDSVETALEEGEGITKVILP
DPPEGVSLGGATARSTGDLAGTGDSEDHSDRDRLVVEFSEDLACTHCGIDISEIETRSFS
FNSPHGACPECEGLGETKEVSEGLVIQDRSKPLKHVFEPWSYDRTYYSRQLDNVADHFGV
SLETPFEELDESIQRQFLYGTDDLVHFEWQTKNGTREKTERFEGVIPNLERRHVETDSDR
AREHIEEFMAVTTCPECEGTRLKAESRHVLVGGSSASDASGTSSEVSSDGTSITEVNRMS
IGDALEHFEGLEASLDERDTKIAEEILKEIRARLGFMEEVGLEYLTLDREASTLSGGESQ
RIRLATQIGSGLVGVLYVLDEPSIGLHQRDNDRLLNTLAELRDLGNTLLVVEHDEETMRR
ADNIIDMGPGPGKRGGEVVVNGSMDDVIESDDSVTGEYLSGERTIPVPDDRRASDTHLTI
EGARQHNLADLDVDLPIGCFTAITGVSGSGKSTLMHDVLYKGLVRRMNDTDVNPGEHDDI
EGIDEIETVRLIDQSPIGRTPRSNPATYTNVFDHIRELFAETNLAKQRGYEKGRFSFNVK
GGRCEACGGQGNVKIEMNFLSDVYVPCEECDGARYNDETLDVTYKDATISDVLDMSVAEA
YDFFEGHTGIRRRLKLLKDVGLDYMRLGQPSTTLSGGEAQRIKLAEELGKKDSGETLYLL
DEPTTGLHPEDERKLIDVLHRLTDEGNTVVVIEHELDLVKNADHIVDLGPEGGENGGRIV
AEGTPETVARTDDSYTGQYLRDLLPKVDLEGPRADRDVAQPAADDD
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgacacgagagtacatcgaggtccgcggtgcggaggaacacaacctcaaggacatcgat
gttgagatcccgcgagaggagctgacggtcgtgacggggctgtcgggatcgggcaagtcc
tcgctggccttcgagacggtgtacgccgagggacagcgccgctacatcgagtcgctctcg
gcctacgccaggaacttcctgggccagatggacaagccacaggtcgagaccgtcgagggc
ctctccccggccatctcgatcgaccagaagaacgccgccaacaacccccgctcgacggtc
gggaccgtcaccgaactccacgactacctgcgcctgctgtacgcccgcatcgggacgcca
cactgtccggagtgtggtcgcgaggtcggcgagcagtccgcacagaacatggtccgtcgg
atgctgtccctgcccgaggggacccgcgcgaagatcgccgcaccggtcgtgcgcgaccag
aagggggccttcgaggagctgttcgaggagctggtcggcgaggggtacgcccgcgtcgag
gtcgacggcgagccctacgacctgacgatcgacgaccccgaactcgacgagaactacgac
cacacgatcgacgtgatcgtcgaccgcgtgagcgtcagcgcggacgcccgttcgcggatc
accgactccgtcgagacggccctcgaagagggggagggcatcacgaaggtgatcctcccg
gacccgccggagggcgtgtccctcggcggggcgacggcgcgctcgacgggcgatctcgcg
gggaccggcgacagcgaggaccacagcgaccgcgaccgcctcgtcgtcgagttctccgag
gacctcgcgtgtacccactgcgggatcgacatctccgagatcgagacccgctcgttctcg
ttcaacagccctcacggggcctgcccggagtgtgagggactcggcgagaccaaggaggtc
agcgagggactcgtcatccaggaccgctcgaagccgctcaagcacgtcttcgaaccctgg
agctacgatcgtacctactactcgcggcagctggacaacgtcgcggaccacttcggcgtc
tccctggagacgcccttcgaggagctggacgagtcgatccagcgccagttcctctatggc
acggacgacctcgtccacttcgagtggcagaccaagaacggcacccgcgagaagaccgag
cgcttcgagggcgtgatcccgaacctggaacgtcgccacgtcgagaccgacagcgaccgc
gcccgcgaacacatcgaggagttcatggccgtcaccacctgtcccgagtgtgagggcacc
cgcctgaaagcggagtcccggcacgtcctcgtcggcgggagttccgcgagcgatgcgagc
ggaacgtcgtcggaggtttcctccgacggtacgtcgatcaccgaggtcaatcgcatgtcc
atcggcgacgcgctggaacacttcgaggggctggaagcgtcgctggacgaacgcgacacg
aagatcgccgaagagatcctcaaagagatccgcgcccggctcgggttcatggaggaggtc
ggcctggagtatctcaccctcgaccgggaggcgtcgacgctctccggcggcgagagccag
cgcatccggctggcgacccagatcgggtccggactggtcggcgtgttgtacgtgctcgac
gagccctcgatcggcctccaccagcgggacaacgaccgactgctgaacacgctggcggaa
ctgcgcgacctcggcaacacgctcctcgtggtcgaacacgacgaggagacgatgcgccgg
gccgacaacatcatcgacatgggccccggtccgggcaaacggggcggcgaggtcgtcgtc
aacggctcgatggacgacgtgatcgagagcgacgacagcgtcaccggcgagtacctctcg
ggcgagcggacgatccccgtccccgacgaccgccgagcgtcggacacccacctcacgatc
gagggggcacgccagcacaacctcgcagatctggacgtggacctgccgatcggctgtttc
accgcgatcacgggcgtctcggggtcgggcaagtcgacgctgatgcacgacgtgctgtac
aagggcctcgtccggcggatgaacgacaccgacgtgaaccccggcgagcacgacgacatc
gaggggatcgacgagatcgagaccgtccgcctcatcgaccagtcgcccatcggtcgcacg
ccgcgctcgaaccccgcgacctacacaaacgtcttcgatcacatccgcgagctgttcgcc
gagacgaacctcgcgaagcagcgaggctacgagaagggccgtttctcgttcaacgtcaaa
ggcggtcgctgtgaggcctgtggcggccagggcaacgtcaaaatcgagatgaacttcctc
tctgacgtgtacgtcccctgcgaggagtgcgacggggcgcggtacaacgacgagaccctc
gatgtcacctacaaggacgccaccatctccgacgtgctggacatgagcgtcgcggaggcc
tacgacttcttcgaggggcacaccggcatccgccgccgcctgaagctcctgaaagacgtg
ggcctggactacatgcggctgggccagccctcgacgacgctctcgggcggggaggcccag
cggatcaagctcgccgaggaactggggaagaaagactccggcgagacgctgtacctgctg
gacgaaccgacgaccgggctccaccccgaagacgagcgcaagctgatcgacgtgctccac
cgcctcaccgacgagggcaacaccgtcgtcgtcatcgagcacgaactcgatctggtgaaa
aacgccgaccacatcgtcgacctcggcccggaaggcggcgagaacggcggccggatcgtc
gccgaagggacgccggagaccgtcgcccggacggacgactcctacaccggccagtacctc
cgtgacctgctcccgaaggtcgatctggaggggccacgcgccgaccgagacgtggcccag
cccgccgcggacgacgactga

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