Halomicrobium sp. LC1Hm: LC1Hm_2991
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Entry
LC1Hm_2991 CDS
T06261
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC1Hm_2991 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hall03021
]
LC1Hm_2991 (rpoA2)
Enzymes [BR:
hall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC1Hm_2991 (rpoA2)
Transcription machinery [BR:
hall03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
LC1Hm_2991 (rpoA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
HTH_43
Motif
Other DBs
NCBI-ProteinID:
QGA84020
LinkDB
All DBs
Position
complement(2807322..2808509)
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AA seq
395 aa
AA seq
DB search
MTRANVTDDIEAIVEDTDLPRRLKDDVYSTIEERDVTVEEADQIAKAVQSRYQETRVDPL
DPVGTVSAQSIGEPGTQMTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVHLD
DEYATDREKAHEVVWKIEATRILALGDISTNVADMLVQIDLNEETLMERWPTVDQVEDVA
EEIAETIESKLGVQTRQAGTMIEFGPDEPSYRDLLQLVEELREVVFKGIEDISRVVIRKE
ETDEGEEFVLYTEGSAFGDVLGIEGIDASRTTCNNIHEIYRNLGIEAARETLINETMHTL
EEQGLDDVNIRHLMLVADIMTNRGEIESIGRHGISGNKESVLARAAYEVTVNHLLDAAIH
GEVDVLEGVIENVIVGKPVQLGTGDVDLRMGASQD
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacacgagcaaacgtaaccgacgacatcgaagcgatcgtggaggatacggacctcccg
cgacggctcaaagacgacgtgtacagtacgatcgaagagcgcgacgtgaccgtcgaagag
gcggaccagatcgccaaggccgtccagtcgcgctaccaggagacgcgcgtcgatccgctg
gacccggtcgggaccgtctcggcccagtcgatcggcgagcccggcacgcagatgacgatg
aacacgttccactacgccggggtcgcagagatcgacgtgacccaggggctgccgcggctc
atcgagctggtcgacgcccggaagacgcccgacacgccgatgatgacggtccacctggac
gacgagtacgcgaccgaccgggagaaggcccacgaggtcgtctggaagatcgaggccacg
cgcatcctcgcgctgggtgacatctcgaccaacgtcgcggacatgctcgtccagatcgac
ctcaacgaggagacgctgatggagcgatggcccaccgtcgatcaggtcgaggacgtggcc
gaggagatcgccgagaccatcgagtcgaagctgggcgtccagacccgccaggccggcacg
atgatcgagttcggccccgacgagccgtcgtatcgcgacctcctccagctcgtcgaggag
cttcgcgaagtcgtcttcaaggggatcgaggacatctcccgcgtggtcatccggaaagaa
gagaccgacgagggcgaggagttcgtcctctacaccgaggggtcggccttcggcgacgtg
ctcggtatcgaggggatcgacgcctcccggacgacgtgtaacaacatccacgagatctac
cgcaacctcggcatcgaggcggcccgcgagacgctgatcaacgagacgatgcacacgctc
gaagagcaggggctcgacgacgtgaacatccggcacctgatgctggtcgccgacatcatg
accaaccgcggcgagatcgagtcgatcggtcgccacggtatctcgggcaacaaggagagc
gtcctcgcgcgtgcggcctacgaggtgacggtcaaccacctgctcgacgccgcgatccac
ggcgaggtcgacgtgctcgaaggcgtcatcgagaacgtgatcgtcggcaagccggtccag
ctcggcaccggcgacgtggacctccggatgggtgcgagccaggactga
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