Halomicrobium sp. LC1Hm: LC1Hm_3016
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Entry
LC1Hm_3016 CDS
T06261
Symbol
dppF2
Name
(GenBank) ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC1Hm_3016 (dppF2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hall02000
]
LC1Hm_3016 (dppF2)
Transporters [BR:
hall02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LC1Hm_3016 (dppF2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
SMC_N
AAA_16
ATPase_2
AAA
ATP-synt_ab
AAA_5
GvpD_P-loop
PRK
NB-ARC
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QGA84043
UniProt:
A0A5Q0UQT5
LinkDB
All DBs
Position
complement(2829509..2830843)
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AA seq
444 aa
AA seq
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MSRTILRTEGLTKYYESDEGFVDRLLGEPQLVRAVDGVDLELEAGETLGVVGESGCGKTT
LGRSMLQLVEPTEGSVYYHDGEQEIDLTEVSNSKLRSLRTDLQYIFQDPFSSLNPRLTVG
DIIGEPLDIHDIASGDARMERIYELLETVGLNPSHANRYPHEFSGGQRQRIGIARALAVD
PEVIICDEPVSALDVSVQAQILNLLEDLQEEFGLSYVFIAHDLSVVEHISDRIAVMYLGE
VAEVGPTESVFNPPHHPYTEALLSAIPEPDPLWEADQTLLSGNVPSPIDPPSGCRFHTRC
PRVIQPDEYDLDQSVWRAVMDLKIRLSETDSLESLTAIPADEDTDPHDAGRDELDQLVRE
EFGLPEQVGDPQVESVLSDMVDDLAQADLDGARSRATEAFESPCERRDPPLTHTGEGQQI
ACLLYEDDYPDPPAVLRDGELAGD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagaacgatcctccgaaccgaggggctcacgaagtactacgagagcgacgagggc
ttcgtcgaccgactgctcggcgagccacagctggtcagagccgtcgacggcgtcgatctc
gaactcgaagccggcgagacgctgggtgtcgtcggtgagagtggctgcgggaagacgacg
ctcggccgctcgatgctccagctcgtcgaacccaccgaggggtcggtgtactaccacgac
ggcgaacaggagatcgacctcaccgaggtctcgaactccaagctgcgatcgctgcgcacc
gacctccagtacattttccaggacccgttttcgagcctgaacccgcgcctgaccgtcggc
gacatcatcggcgagccactggacatccacgacatcgccagcggcgacgctcgcatggag
cggatctacgaactcctcgagacggtcgggctcaaccccagccacgccaaccgttacccc
cacgagttctccgggggccagcgccagcgtatcggcatcgcgcgagcactggcggtcgat
ccggaggtcatcatctgcgacgagcccgtctcggcactggacgtgtccgtccaggcccag
attctgaacctgctcgaagacctccaagaggagttcggactctcctacgtcttcatcgcc
cacgacctcagcgtcgtcgagcacatctcggatcggatcgcggtgatgtacctcggggag
gtcgccgaggtcgggccgaccgagtcggtgttcaacccgccacaccacccctacacggaa
gcgctgctgtcggcgatccccgagcccgaccccctctgggaggcagaccagacgctgctg
tcgggcaacgtcccgtcgccgatcgacccgccaagcggctgtcggttccacacgcggtgt
ccgcgggtgatccagcccgacgagtacgatctcgaccagtccgtgtggcgtgccgtcatg
gacctgaagatcagactctccgagaccgactccctggagtctctgacggcgattccggcc
gacgaagacaccgatccgcacgatgccggccgggacgaactggaccagctcgtccgcgag
gagttcgggctccccgagcaggtcggggacccccaggtcgagtcggtgctgtctgacatg
gtcgacgacctggcccaggctgatctggatggcgcgcgcagccgtgcgacggaagccttc
gagtcgccctgtgaacgacgggacccgccgttgactcacaccggcgagggccagcagatc
gcctgtctgctgtacgaggacgactatcccgatccaccggccgtcctccgtgacggcgag
ctcgcgggcgactga
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