Halomicrobium sp. LC1Hm: LC1Hm_3198
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Entry
LC1Hm_3198 CDS
T06261
Symbol
helS
Name
(GenBank) Superfamily II helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
hall
Halomicrobium sp. LC1Hm
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hall03400
]
LC1Hm_3198 (helS)
Enzymes [BR:
hall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC1Hm_3198 (helS)
DNA repair and recombination proteins [BR:
hall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LC1Hm_3198 (helS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
Helicase_C
HHH_5
ResIII
HTH_61
DNA_pol_lambd_f
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
QGA84216
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All DBs
Position
2984504..2986936
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AA seq
810 aa
AA seq
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MDVADLPGVPSWLPEHLQSAGIEALYPPQAEAVEAGVTRGENLVASIPTASGKTLIAQLA
MLSAITDAAGTSEVRPRDDPENPSADGDGTALGGTALYIVPLRALASEKQAEFEQFEQYG
LDVGVSTGNYESDGGWLADKDIVVATSEKVDSLVRNDAPWLDDLACVVSDEVHLVDDAER
GPTLEVTLAKLRRINPDMQTVALSATIGNADVLAEWLDAALVDSDWRPISLKKGVHFGQA
LHLEDGSQSELPVHNSEKQTAAIVRDTLDDDGSTLVFVNSRRNAEAAAGRLASVTREALT
PEERKQLADVAAEIRDVSDTETSDDLADAVADGAAFHHAGLASGHRELVEEAFRDRLLKV
VSATPTLAAGVNTPSRRVVVRDWRRYDGTAGGMQPLSVLEVHQMMGRAGRPGLDPYGEAI
IPAASHDELDELFDRYVWADPEPVQSKLAAEPALRTHLLATVASGFARSRDGLLEFLERT
LYATQTDESGRLARVVDEVLGYLQRNDFLERDGEELSATSLGHTVSRLYLDPMSAAEIID
GLRSGGGSGASGDDASEEPAGFTTASELADEAGDGEAVNDPTAMGLYHLVARTPDMYELY
LRSGDEEEYSQIAFERETEFLGRMPSEFEDDRFADWLAALKTARLLEDWASEVDEDEITD
RYGVGPGDIRGKVESAQWLLGAAESLASELGLDAAPAIRRARTRVEHGVREELVDLAGVR
GVGRKRARRLFDAGIESRADLRDAEKSVVLAALRGRAKTAENVLESAGHRDPSMDGVEPS
EDVSCERSDGDGLASDDEKTTDDQTSLGDF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggacgttgcggacctgccaggtgttccgtcgtggcttccagagcacctgcagtcggcg
gggatcgaggcactgtacccaccgcaggccgaggccgtcgaggccggcgtcacgcggggc
gagaacctcgtcgccagcatcccgaccgccagcggcaagaccctgatcgcacagctggcg
atgctgtcggcgatcacggacgccgccggaacgagcgaagtgcgtccgcgggacgatccg
gagaacccatccgcggacggcgacggcaccgctctcggcggtacggcgctgtacatcgtt
cccctgcgggcgctggccagcgagaagcaggccgagttcgagcagttcgagcagtacggg
ctcgacgtgggcgtctcgacgggcaactacgagtccgacggcgggtggctcgccgacaag
gacatcgtcgtcgccaccagcgagaaggtcgactcgctggtgcgcaacgacgcgccgtgg
ctcgacgacctggcctgtgtcgtcagcgacgaggtccacctcgtcgacgacgccgaacgc
gggccgacgctggaagtgaccctcgcgaagctgcgacggatcaaccccgacatgcagacg
gtcgcgctgtcggcgacgatcggcaacgccgacgtgctcgccgagtggctcgacgccgca
ctcgtcgactcggactggcgaccgatctccctgaagaagggggtccacttcggacaggcg
ctccacctcgaagacggcagccagtcggagctgccggtccacaatagcgagaagcagacc
gccgccatcgtccgggacaccctcgacgacgacggctcgacgctggtgttcgtcaactcc
cggcgcaacgcggaggccgccgcgggacgactggccagcgtcacccgcgaggccctgact
ccggaagagcgaaagcaactcgcggacgtggccgcggagatcagagacgtgagcgacacc
gagacgagcgacgacctggccgacgccgtcgccgacggggccgcatttcaccacgccgga
ttggcgtcgggacaccgcgaactcgtcgaggaggccttccgcgaccgactgctgaaggtc
gtcagcgccacgccgacgctggcggcgggggtcaacacgcccagccgccgggtcgtcgtc
cgggactggcgacgctacgacggcaccgctggcggaatgcagcccctctcggtactcgaa
gtccaccagatgatggggcgggccggccggccggggctggacccctacggcgaggcgatc
atccccgctgcgagccacgacgaactcgacgagctgttcgaccggtacgtctgggccgat
cccgagccggtccagtcgaagctggccgccgagccggcactgcggactcacctgctggca
acggtcgcgagtgggttcgcccgctctcgggacgggctgctcgaattcctcgaacgaacg
ctctatgccacccagaccgacgagagcggccggctggcacgggtcgtcgacgaggtgctg
ggctacctgcagcgcaacgactttctggagcgtgacggcgaggagctctcggcgacctcg
ctgggccacaccgtgtcccggctctacctcgacccgatgagcgccgccgagatcatcgac
ggcctgcggtcgggcggtggctctggtgccagcggcgacgacgcgagcgaggaaccggcc
ggtttcacgaccgcgagcgagctcgccgacgaggcgggcgacggcgaggcagtcaacgac
ccgaccgcgatgggactgtaccacctcgtcgcgcgcaccccggacatgtacgagctgtac
ctccgttctggcgacgaggaggagtacagccagatcgccttcgaacgtgagacagagttc
ctcgggcggatgccgtcggagttcgaagacgaccggttcgcggactggctcgccgcgctc
aagaccgcacgcttgctggaggactgggccagcgaggtcgacgaggacgagatcaccgac
cgctacggcgtcggccccggcgacatccgcggcaaggtcgagtccgcccagtggctgctg
ggggccgccgagtcgctggcgagcgaactcgggctcgacgccgcgccggccatccggcgc
gcccggacccgagtcgagcacggcgtccgcgaggagctggtcgacctggcgggcgtccgc
ggcgtcgggcgcaagcgcgcacgacggctgttcgacgccggcatcgagagccgtgccgac
ctccgagacgccgagaagtcggtcgtgctggcggcgctgcgcggcagggccaagaccgcc
gagaacgtcctggagagcgccggccaccgcgatccgtcgatggacggcgtcgagccctcc
gaggacgtgtcgtgcgagcgaagcgacggcgacgggctagcgtcggacgacgagaagacg
acagacgaccagaccagcctgggtgatttctga
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