Halomicrobium sp. LC1Hm: LC1Hm_4017
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Entry
LC1Hm_4017 CDS
T06261
Name
(GenBank) Signal transduction histidine kinase with PAS and REC domains
Organism
hall
Halomicrobium sp. LC1Hm
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS
PAS_9
GAF_2
PAS_3
PAS_8
HATPase_c
GAF_3
Response_reg
HisKA
GAF
Diguanyl_cycl_sensor
PAS_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QGA84352
UniProt:
A0A5Q0URL5
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All DBs
Position
pLC1Hm-01:13141..17043
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AA seq
1300 aa
AA seq
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MNHTENATSEEIRLLYVNDDTDFVDLARAKLQNHSSAFEISTAGTVAAAREQIETAAIDC
VVTSYSLPDGTGIELIEQLRSADTELPTILFTGRGNERIASEATQAGVSDYIPLRADQHN
FELLARRIHTLVEATRKAAIAQRLSDRFQRTLERATDAIYAVDDDWRIEYMNEKMADRIG
RDPESIVGSRIWDEFPSIVGTELEERYRTAMETGEPVSFEQRLGDPFDYWVEVRAFPDDD
GLTVFSRETTAERERERELERSAAILENIHDIVFVVGEDGIVKFANGAGKRLVGENQSTT
LDGRQLDAVVEERLSDDEAEQLQSVIDAALDRPEGDGGLTGLYDSDLQVDMAVGNDERTF
DIRVTPFRSGTSEQVLVVARDITEQSAVKQRVERERDALRELQGIMAKSDVSGETRLREL
LAVGCRTLDLEIGIASRVRGSEYTVEAVHAPEADIELGAQFELEATYCAEVIDDDGICAF
TDAVADGKRTHPAYRELGLESYIGAPLVVDGERYGTINFSSPTTRVTPFEVAERTFVELL
SELVSTEIARSRDQTELERQDFLFERVQDIAEIGVWEYFPSTGDLEWSDGVRRIHGVDDD
YDPSLESALDFYHPDDRETIATAVERTLEHDEAYDLDLRIVRADGEIRDVRVWGERVDST
PHGTTVLRGVFQDITERKAQERDHRELAEEYEALLETSGDAIFLLNVDTTGSEPAFEFSR
LSAGYENQTGLTTEAVRHQTPSKVFGAERGAALEANYSRCVEQREPISYREELAIDEGAR
FWETSLAPVMVDGEIVKIVGIARNVTEQVERERDLEATNQRLESLIEATPLTVMEVDRDG
IVTRWNDEAEKMFGWSRAEVLGEPNPMIPEDRQTEFDEHRQRAMNGERIRGKEIRRETKD
GDELDLLLSVAPISDPDGEVTSILAVLEDITEQKELETKLRSLQETAQRLSRAQSSDEIG
EIAVEAAVEILGFELTGIWEADERADELVPLASSEAVGDLLGELPQLQPEENLAWEAFES
SELRTYDDLQAEPGIDEADALPASGLFVPLGEYGLVGVGTSNERGFSETDVDLFRILGAT
VEAAFGRANREAKLQRQNERLDQFASVVAHDLRNPLSVAIGFTDIVQQTQDPAHFEKIET
AHERIERLIDDLLTLARGESTVTETEEIDLETIATEAWGYVDTSAATLTVESVPVVAGDS
GRLTQLFENLFRNAVEHGGEEVAVSVGRLAETDGFYVEDDGVGIPPEKRATVFEHGTTTN
EGGTGFGLSIVEDIAKAHGWTVSVTGGTAGGARFEFEMSP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatacagagaacgccacgtcggaagagattcgtcttctgtatgtgaacgacgac
accgacttcgtcgatctggcacgcgccaagctccagaatcactcttcggcgttcgagatt
tcgactgccggcaccgtcgcagccgcccgtgaacagatcgagacggcggccatcgactgt
gtggtcacttcctactcgctgccggacggaacgggaatcgagctcatcgagcagctccga
tcggcagacaccgagttgccgacgatcctgtttaccggcaggggcaacgagcggatcgcc
agcgaagcgacgcaggcgggcgtctcggactacatcccgctgcgggcagaccagcacaac
ttcgagctactcgcacgccgcatccacacgctggtcgaagccacacgcaaagcggccatc
gcacagcggctctccgaccggttccagcggacgctcgaacgtgccacagacgcgatctac
gcggtagacgacgactggcggatcgagtacatgaacgagaagatggccgaccggatcggc
agggacccagagagcatcgtcggcagcagaatctgggacgagttcccctccatcgtcggc
acagaactcgaagagcggtatcggactgccatggagaccggcgagccggtgtcgttcgag
cagcgcctcggcgaccctttcgactactgggtcgaggtccgggcgtttcccgacgacgac
ggcctgaccgtcttctcgcgtgagaccacggccgaacgggagcgagagcgagaactggag
cgcagcgcggcgatcctcgaaaacatccacgacatcgtgttcgtcgtcggcgaggacggc
atcgtgaagttcgcgaacggagccgggaaacgcctggtcggggagaaccagtcgacgaca
ctcgatgggcgacaactcgacgcggtcgtcgaggagcgactctccgacgacgaggcagag
cagctacaaagcgtcatcgacgccgcactcgaccggccagagggcgacggtggcctgacc
ggcctgtacgactcggacctacaggtcgatatggcggtcgggaacgacgagcggaccttc
gacatccgcgtgacgccgttccggagtggcaccagcgagcaggtcctcgtcgtcgcccga
gacatcacggaacagagcgcagtcaagcaacgagtagagcgagagcgtgacgcgctccga
gagcttcagggcatcatggcaaagagcgacgtttcgggcgagacccggctccgggaactg
ctagcggtcggctgtcggacgctggacctggagatcgggatcgcgtcgcgcgttcggggc
agcgagtacaccgtcgaggcagtccacgcaccggaagccgacatcgaactgggagcgcag
ttcgagctcgaagcgacgtactgtgcggaggtcatcgacgatgacgggatctgtgcgttc
accgacgcggtcgccgacggaaagcggacccatcccgcatatcgcgaactcggcctggag
tcgtacatcggtgcgccactcgtcgtcgacggtgagcgctacggaacgatcaacttctcg
agcccgaccacacgagtcaccccgttcgaggtggccgagcggacattcgtcgaactgttg
tcggaactggtgagtaccgagatagcccgaagtcgcgaccagaccgaactcgaacggcag
gacttcctcttcgagcgggtacaggacatcgcggagatcggagtctgggagtacttcccc
tcgacgggcgatctcgagtggtccgacggcgtccgtcggatccatggtgtcgatgacgac
tacgacccgtcactcgaaagcgcgctcgacttctaccatcccgacgacagggaaacgatc
gcgactgctgtcgagcggacactcgaacacgacgaggcatacgacctcgacctccggatc
gttcgagccgacggcgagatccgggacgtgcgcgtgtggggcgaacgcgtcgacagcacg
cctcacggcacgaccgtgctccgtggcgtctttcaggacatcaccgagcggaaagcccag
gagcgcgaccaccgagagctcgcagaggagtacgaggcgctgctggagacgtccggtgac
gcgatcttcctgctgaacgtcgatacgaccggctcggagccagcattcgagttctcacgg
ctcagtgcgggatacgagaatcagaccgggctcacgaccgaggccgttcgccaccagacg
ccaagcaaggtgttcggagcggaacgcggcgcagcgctcgaagcgaactacagccgctgt
gtcgagcaacgagagccgatttcgtaccgcgaagaactggccatcgacgagggcgcgcgg
ttctgggagacgagcctcgcaccggtgatggtcgacggtgagatcgtcaagatcgtcggt
atcgcacgcaacgtcaccgaacaggtcgaacgtgagcgggatctcgaagcgacgaaccag
cggctcgaatcgctcatcgaggcgacgccactcacggtgatggaggtcgaccgtgacggc
atcgtcactcgctggaacgacgaggccgagaagatgttcggctggtcgcgagcggaagtg
ctcggggagccaaacccgatgatccccgaagacaggcagaccgagttcgacgaacatcga
cagcgagccatgaacggcgagcggatccgcggcaaggagatacgacgagagaccaaggac
ggcgacgaactggacctactcttgtcggttgcgccgatcagcgatcccgacggcgaggtg
acgagcatcctcgcagtgctcgaagacatcaccgaacaaaaagaactggagacgaaactg
cgctcgctacaggagacggcccagcggctcagcagggcacagtccagtgacgagatcggt
gagatcgccgtcgaggcagccgtcgagattctgggcttcgagctgacgggaatctgggag
gcagacgaacgagcggacgaactcgttccgctggcgtcgagtgaggccgtcggggacctg
ctcggcgagttgccacagctccagcccgaggagaatctggcctgggaggcgttcgagtcc
tcggagctgcggacgtacgacgatctccaggcggagccgggaatcgacgaggcagacgcg
ctgccggcgagtgggctgttcgtcccactgggtgagtacgggctcgtcggcgtcgggacc
tcgaacgagcgagggttctccgagacggacgtagacctgtttcgcatcctcggagcgacc
gtcgaagccgccttcggtcgggcgaacagagaggcgaagctacagcgccagaacgaacgt
ctggaccagttcgcgagcgtcgtcgctcacgacctcaggaacccgctcagcgtcgcgatc
gggttcaccgacatcgtccagcagacacaggatccggcacacttcgagaagatcgagacc
gcacacgagcgcatcgagcgtctgatcgacgacctgctcacgctcgcgcgtggcgagtcg
accgtgaccgagaccgaggagatcgacctcgaaacgatcgcgacggaagcgtgggggtac
gtcgacacgagcgcggcgacactgacggtcgaatctgtcccggtcgtcgcgggcgacagt
ggtcgcttgacccaactgttcgagaatctctttcggaacgccgtcgaacacggcggcgaa
gaggttgcagtgagcgtgggacgactggcagagacggacgggttctacgtcgaagacgac
ggtgtcggcattccgccggagaagcgagcgacagtgttcgaacacggcaccaccaccaac
gagggcggcaccggcttcgggctctcgatcgtcgaagacatcgcgaaggcccacggctgg
acggtcagtgtcaccggcgggacagcgggcggagcgcggttcgagttcgagatgtccccg
tga
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