Halomicrobium sp. LC1Hm: LC1Hm_4038
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Entry
LC1Hm_4038 CDS
T06261
Name
(GenBank) HEAT repeats containing protein
Organism
hall
Halomicrobium sp. LC1Hm
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Gene cluster
GFIT
Motif
Pfam:
Pkinase
HEAT_2
PK_Tyr_Ser-Thr
HEAT
HEAT_EZ
Adaptin_N
TOR1L1_N
Cnd1
INTS1_R4
PDS5
Arm
Motif
Other DBs
NCBI-ProteinID:
QGA84373
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All DBs
Position
pLC1Hm-01:complement(45321..48143)
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AA seq
940 aa
AA seq
DB search
MSDTDEGEVHLDEARAFLATLPDDPAAYTEDDRSRIEELLLSDNHGVVHVTAQLAREAAA
RDPGAVASLVQPLIDAVVHTDRISRPTLVAAIAEFDRTRVAAAEPAFDRTPVARADPVGQ
YHRTLADTDNEELARSKRAAALAAIYDLFPQQVRDTVPTLLDCLEPTEDDLGLLCEAAGK
ALGTIAGKDEQVRAQVVERFERELDRGALPNKGVVYGVRNLVTCRSDSGASLVEPLVEAT
MQSGVESAVSEASRWHVVSAVETIAEDRPALLDPHVDRLTLLLTDDESMVRKGAIDLFGT
LGETEPAVLERVADDLVAAADDSDSKIRRKAVTALAPLEARLAEAAERATRAHLSALSSA
PDFEKSTVLGELGRLAEHCPDLVVDGLDGMVDHLDHQSWATRSSAASAIGRLGGERPAAV
RPLVDQHATGAAVSAGTAPLLDLLDDAEESVRADAVDALGRIGAADRELADAVLPAVLAT
VDDGDPLVEQRGLQALGQIGEAHPDAVTDDHVSSVVTRLGHVSAMVRAAAAEAIGAFAEG
GRELRAARDPLVDLLDDYYPSPRVEACGALAALGAASAAEQIAPLRTHYDDDVRAAAQAA
LAALDYDPGSSTERDAESPADAASGSERPAGARSEATDHRVRDEQSETTSESASTAIPTG
QPTQAPSLSLDYGDVETGRVVGRGGNAIVREGTVEIDGASRTVAVKEPVTEGTQTADDIA
AFEREARQWERLSDRAHVVAVIDWDVEPLPWIALEYMDGGSLADRIGACDDRQALWICER
VANAVRHDQTGMAHLDLKPANILFEATPEGVWDVPKVADWGIARLLNEHGATAGGMTATY
AAPEQFDPDTYGTPDSKTDIYQLGVVLYELLVGEPPFTGSDVAVMQSVLSEDPELPGERV
DALPAGIDDTVETALAREPEHRFETIERLQSRLQAHLDEL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccgacgagggcgaggtccacctcgacgaggctcgcgcgttcctcgcgacg
ctgcccgacgacccggccgcgtacaccgaggacgaccggtcgcgcatcgaggagctgctg
ctgtcggacaaccacggcgtcgtccacgtcacggcgcaactggccagggaggcagcggca
cgggacccaggggcagtggcatcgctggtccagccgctgatcgacgcggtcgtccacacc
gaccggatcagccgtccgacgctggtggccgcgatcgcggagttcgatcgcacacgagtc
gcggcggcagagccagcgttcgaccggacgccggtcgcgcgggccgatcccgtcggtcag
taccaccgaacgctggccgacaccgacaacgaggagctcgcccgctcgaagcgggcggca
gcactcgccgcgatctacgacctctttccccagcaagtccgggacacggtcccgacgctg
ctcgactgtctggaaccgaccgaggacgatctcggactgctctgtgaagccgccgggaag
gcgctggggacgatcgcgggcaaagacgagcaggtgcgcgcgcaggtcgtggaacggttc
gagcgcgaactcgaccgcggcgcgctcccgaacaagggggtggtgtacggcgtgcggaac
ctcgtgacctgccgctcggactcgggggcgtcgctggtcgagccgctggtcgaggcgacg
atgcaaagcggcgtcgagagcgcggtctccgaggcgtctcgctggcacgtcgtcagcgcg
gtcgagacgatcgccgaggaccgaccggcgctcctcgatccccacgtagaccggctcaca
ctgctcctgacggatgacgagtcgatggtcaggaagggggcgatcgacctgttcgggacg
ctcggcgagacggagccggccgtcctcgaacgcgtcgccgacgacctcgtggccgccgcc
gacgattccgactcgaagatacgacgaaaggccgtgaccgccctcgccccgctggaggct
cgactggccgaggcagccgagcgcgcgacacgcgcgcacctctcggcgctgtcgtcggca
ccggacttcgagaagagcacggtgcttggcgagctgggccggctggccgagcactgcccg
gacctggtcgtcgacgggctggacgggatggtcgaccacctcgaccaccagtcctgggcc
accagatcgagtgcggcctctgccatcggtcgactcggcggcgaacgcccagcggccgtt
cgaccgctggtcgaccagcacgccacgggagcggccgtctcggccgggacggctcccctc
ctcgatctcctcgacgacgcggaggaatcggtccgggcggacgccgtcgacgccctcgga
cggatcggcgcggccgatcgcgaactggccgacgccgtgctccccgccgttctcgcgacc
gtcgacgacggcgacccactcgtcgaacaacgagggctccaggcgctcggccagatcggc
gaggcccatcccgacgcggtgaccgacgatcacgtctcgtcggtcgtcactcggctggga
cacgtaagcgcaatggtcagggcggccgcggccgaggcgatcggcgcgttcgccgagggg
ggtcgcgagctccgcgccgcgcgcgatccgctcgtcgacctgctcgacgactactacccc
agtccccgcgtcgaagcctgcggggcgctcgcggcgctcggcgcggcgtcggcggccgag
cagatcgcgccactccgcacgcactacgacgacgacgtgcgggcggccgcccaggcggca
ctcgcggcgctcgactacgatcctggcagttcgaccgagcgggatgcggagtcgccggcc
gacgcggcctccggttcggagcgcccggcgggggcacggtccgaggcgaccgatcaccgg
gtccgcgacgagcagtcggagaccaccagcgagtccgcttcgacggcgataccgaccggc
cagccgacgcaggccccgtcgctgtcgctggactacggcgacgtggagaccggtcgagtc
gtcggccgtggcggcaacgcgatcgtccgggaggggacagtcgagatcgacggggcgtcg
cggacggtcgccgtcaaagagcccgtcacggaggggacacagacggccgacgacatcgcc
gccttcgagcgcgaggcgcggcagtgggagcgactctcggatcgggctcacgtcgtcgcc
gtcatcgactgggacgtcgagcccctcccctggatcgcactggagtacatggacggggga
tcgctggcggacaggatcggcgcgtgtgacgaccgccaggcgctgtggatctgtgagcgc
gtcgcgaacgcggtccgacacgaccagaccgggatggcacacctcgatctcaaacccgcg
aacatcctcttcgaggcgacgcccgagggcgtctgggacgtgccgaaggtcgccgactgg
ggaatcgcccgactgctgaacgagcacggcgcgactgccggcgggatgaccgcgacgtac
gcggcaccggaacagttcgatcccgacacctacgggacgcccgacagcaagacggacatc
taccagctcggggtcgtcctctacgaactcctcgtcggggagcctcccttcaccggttcc
gacgtggccgtgatgcagagcgttctgtccgaggaccccgaactgccgggcgagcgagtc
gacgctctccccgccgggatcgacgacaccgtcgagacggccctcgccagggagccagag
caccgcttcgagacgatcgaacggttgcagtcgcggctgcaggcccacctcgacgagctg
tag
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