Haloprofundus sp. MHR1: FCF25_00865
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Entry
FCF25_00865 CDS
T05952
Name
(GenBank) DNA-directed RNA polymerase, subunit E''
KO
K15171
transcription elongation factor SPT4
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
FCF25_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halm03021
]
FCF25_00865
03019 Messenger RNA biogenesis [BR:
halm03019
]
FCF25_00865
Transcription machinery [BR:
halm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
FCF25_00865
RNA polymerase I system
FCF25_00865
Messenger RNA biogenesis [BR:
halm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
FCF25_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_Ribbon_1
DZR
Zn_ribbon_RanBP
HypA
Zn_ribbon_Nudix
DUF7129
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QCJ45756
UniProt:
A0A4D7H7W0
LinkDB
All DBs
Position
186545..186742
Genome browser
AA seq
65 aa
AA seq
DB search
MAKPRLACRECHYINEPDSQSCDHCGSSSLTEDWAGYVVITHPEESEIAREMNVDEPGGY
ALKVR
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccccgcctcgcctgccgtgagtgccactacatcaacgaaccggactcacag
agctgtgaccactgcgggtcgtcgagcctcaccgaagactgggcggggtacgtcgtcatc
acccacccggaagagagcgaaatcgcccgcgagatgaacgtcgacgaacccggcggctac
gcgctgaaggtccggtga
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