Haloprofundus sp. MHR1: FCF25_01155
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Entry
FCF25_01155 CDS
T05952
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halm03016
]
FCF25_01155 (truA)
Enzymes [BR:
halm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FCF25_01155 (truA)
Transfer RNA biogenesis [BR:
halm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCF25_01155 (truA)
Prokaryotic type
FCF25_01155 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QCJ45809
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All DBs
Position
239194..240063
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AA seq
289 aa
AA seq
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MRAFRLAYDGQPYYGFQRQPDVPTVEGALFDALAKLGVYDETRHRPSGYAAAGRTDAGVS
AVAQTVAFDCPDWCTPGAVNSELPGTVRAWAAADVPDDFHATHDATRREYTYHLYAPSGS
GRDGGDGDDADYPTPDPYAAVDDDRARAALSALCGEHDFDNLTPDDRNTVRELSGSLRRD
GEFLVLTVSAPGFARELVRRVVSLVRIVGSGAPTERIERAFAADSLEGREGIPPAPAGGL
VLTDVDYPGVEFERDEDAITTVKEVFGASRVESAVRTRVCETVLDGTRA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgttccgcctcgcctacgacggccagccctactacggcttccagcgccagccc
gacgtgccgacggtcgagggggcgctgttcgacgcgctggcgaaactcggcgtctacgac
gagacgcgccatcggccgtcgggctacgccgccgcgggacgtaccgacgctggcgtctcc
gccgtcgcgcagaccgtcgccttcgactgtcccgactggtgtacgccgggagcggtcaac
agcgagctcccgggaaccgtccgcgcgtgggctgcagccgacgttcccgacgacttccac
gcgacgcacgacgcgactcggcgcgagtacacgtaccacctctacgcgccgtcaggcagt
ggacgcgacggcggcgatggcgacgacgccgactacccgacgccggacccctacgccgcc
gtcgacgacgaccgagcgcgggcggcgctctcggcgctctgcggcgaacacgacttcgac
aatctcacgcccgacgaccgaaacacggttcgagagctgtcggggtcgctccggcgcgac
ggcgagtttctcgttctcaccgtctccgcgccggggttcgcccgcgaactcgtccgccgg
gtcgtctcgctcgtccgtatcgtcggctccggagcgccgacggagcgaatcgagcgagcg
ttcgccgccgactcgctggagggccgcgagggaattccgcccgcacccgcgggcgggttg
gtgctcaccgacgtcgactacccgggcgtcgagttcgagcgcgacgaagacgcgataacg
acagtgaaagaggtgttcggcgcgtcgcgcgtggagagcgcggtcagaacgcgcgtctgc
gagacggtgctcgacgggacgagagcgtag
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