KEGG   Haloprofundus sp. MHR1: FCF25_04225
Entry
FCF25_04225       CDS       T05952                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
halm  Haloprofundus sp. MHR1
Pathway
halm03030  DNA replication
Brite
KEGG Orthology (KO) [BR:halm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FCF25_04225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halm03032]
    FCF25_04225
DNA replication proteins [BR:halm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     FCF25_04225
SSDB
Motif
Pfam: AAA RCF1-5-like_lid RuvB_N AAA_30 AAA_22 AAA_16 nSTAND3 DNAX_ATPase_lid PT-TG RNA_helicase AAA_28 AAA_25 AAA_assoc_2 AAA_14 AAA_33 AAA_lid_RFC1 NPHP3_N Zeta_toxin AAA_5 HP_1247_M NACHT Rhodanese RsgA_GTPase AAA_7
Other DBs
NCBI-ProteinID: QCJ46373
LinkDB
Position
complement(849488..850993)
AA seq 501 aa
MDWTEKYRPRSLSAIRGNNKARDQFREWAETWDDHGDAVIVYGSPGVGKTSAAHALANDM
GWETVELNASDQRTAAVIERFAGRAAMNATLGGSSSGGSGRQLIVLDEADNIHGNYDRGG
ARAITKLVKEAGQPMVLIANEFYEMSRGLRNACESIEFRDVSARSIVPVLRDICRQEGVE
YESAALERIADVNSGDLRGAVNDLQAAAEGRDAITEESVATSDRDRSVGIFEFLDQVLKE
ESPQEALYTSYDVDETPDDLTKWVEDNMLDVYEGEEVARAYEFLANADRWLGRVRASQDY
SYWRYAGDNLAAGVAAARDETKGGWTRYGRPQFWRSKDKTGDEVARRVAESSGTSMSIAR
QRIVPYLSVMTHHCKPRDLTVAMAAYYEFEEKHVAHVTGSGESTKKVQSIVEDARELREE
AMEEHSGGAFAGSTGGTAGDGSDDGARGDDARDDETGAGTETTEDDGAAESAADGGDESD
ASDSDDGDGGDDGQAGLTDFF
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggattggacggagaagtatcgccctcggtcgctgtcggcgatacgcggcaacaacaaa
gcccgcgaccagttccgcgagtgggccgagacgtgggacgaccacggcgacgcggtcatc
gtctacggcagtcccggcgtcggcaagacctccgcggcgcacgcgctggccaacgacatg
ggctgggagaccgtcgagttgaacgcctccgaccagcggaccgccgccgtcatcgaacgg
ttcgccggccgcgcggcgatgaacgcgacgctcggcgggtcgagttccggcggctctggc
cgacagctcatcgtcctcgacgaggcggacaacatccacggcaactacgaccgcggcggc
gcgcgcgccatcacgaagctcgtcaaggaggcgggacagccgatggtgctcatcgccaac
gagttctacgagatgagccgcgggctgcgcaacgcctgcgagtccatcgagttccgcgac
gtgagcgcgcgctccatcgttcccgtcctccgagatatctgccgacaggagggcgtcgag
tacgagtccgcggcgctcgaacgaatcgccgacgtcaacagcggcgacctccgcggcgcg
gtgaacgacctgcaggccgccgccgagggccgcgacgcgatcaccgaggagtccgttgcg
acgagcgaccgcgaccgctccgtgggcatcttcgaatttttggaccaggtgctgaaagag
gaatccccgcaggaggcactgtacacctcctacgacgtcgacgagacgcccgacgacctc
acgaagtgggtcgaggacaacatgctcgacgtgtacgagggcgaggaggtcgcccgcgcc
tacgagttcctcgccaacgccgaccggtggttaggtcgcgtgcgcgcgagtcaggattac
agctactggcgctacgcgggtgacaacctcgccgcgggcgtcgccgccgcccgcgacgaa
accaaaggcgggtggacgcgctacggtcgcccgcagttctggcgctcgaaggacaagacc
ggcgacgaggtggcccgccgcgtcgccgagtccagcgggacgagcatgagcatcgcgcgg
caacgcatcgtaccgtacctctcggtgatgacccaccactgcaagccgcgcgatctcacc
gtcgcgatggcggcgtactacgagttcgaggagaaacacgtcgcccacgtcaccggcagc
ggcgagtcgacgaagaaggtgcagtccatcgtcgaggacgcccgagagctccgcgaggag
gcgatggaggaacactccggcggcgcgttcgccggttcgacgggcggaaccgccggcgac
ggaagcgacgacggagcgcggggcgacgacgcacgagacgacgaaacgggcgccggtacc
gagacgaccgaagacgacggagcggccgaatcggcggccgacggcggcgacgagagcgat
gcgagcgacagcgacgacggcgacggcggcgacgacggccaagcgggcctcaccgacttc
ttctga

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