Haloprofundus sp. MHR1: FCF25_04440
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Entry
FCF25_04440 CDS
T05952
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm00020
Citrate cycle (TCA cycle)
halm00640
Propanoate metabolism
halm00660
C5-Branched dibasic acid metabolism
halm00720
Other carbon fixation pathways
halm01100
Metabolic pathways
halm01110
Biosynthesis of secondary metabolites
halm01120
Microbial metabolism in diverse environments
halm01200
Carbon metabolism
Module
halm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
halm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FCF25_04440 (sucD)
00640 Propanoate metabolism
FCF25_04440 (sucD)
00660 C5-Branched dibasic acid metabolism
FCF25_04440 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
FCF25_04440 (sucD)
Enzymes [BR:
halm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FCF25_04440 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QCJ46414
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Position
complement(891479..892348)
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AA seq
289 aa
AA seq
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MSILVDDDTRVVVQGITGGEGKFHTGQMEAYGTNVVAGAVPGKGGQEVDGIPVYDTVDEA
VREEDADASVIFVPPAFAADAIFEALDTDLDLAVAITEGIPTQDMAKVNKRLSEVDTRLL
GPNCPGIITPGEAKLGILPGNIFADGNVGLVSRSGTLTYQVVDNLTARGIGQTTAIGIGG
DPIIGTDFVDALSLFEEDDETEAVVMCGEIGGEDEEEAAAFIDEHMDTPVAGFIAGRTAP
PGKRMGHAGAIVSGSGTGTAESKIDALNDASVPVGDTPEEVADNIESFL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcattctcgtagacgacgacacgcgcgtagtggtacagggcatcaccggcggtgag
ggcaagttccacaccggccagatggaggcgtacgggacgaacgtcgtcgccggcgcggtc
cccggcaaaggcggccaggaggtcgacggcatcccggtgtacgacaccgtcgacgaggcc
gtccgcgaggaagacgccgacgcctcggtcatcttcgtcccgccggcgttcgccgccgac
gccatcttcgaggcgctcgacaccgacctcgacctcgccgtcgccatcaccgagggcatc
ccgacccaggacatggcgaaggtgaacaagcgcctctcggaggtcgacacccgtctgctc
ggcccgaactgccccggcatcatcacgcccggcgaggcgaaactcggcatcctccccggc
aacatcttcgccgacggcaacgtgggtctcgtctcccgctcggggacgctgacgtaccag
gtcgtcgacaacctcaccgcccgcggcatcggtcagacgaccgccatcggcatcggcggc
gaccccatcatcggcaccgacttcgtcgacgccctctcgctgttcgaggaggacgacgag
accgaggccgtcgtcatgtgcggcgagatcggcggcgaagacgaggaggaagccgccgcg
ttcatcgacgagcacatggacacgcccgtcgccggcttcatcgccggccggaccgcgccg
ccgggcaagcgcatgggtcacgccggcgctatcgtctccggtagcggtaccggcaccgcc
gagagcaagatcgacgcgctcaacgacgcgagcgttcccgtcggcgacacgcccgaggaa
gtcgccgacaacatcgagtcgttcctctaa
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