Haloprofundus sp. MHR1: FCF25_05510
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Entry
FCF25_05510 CDS
T05952
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm00260
Glycine, serine and threonine metabolism
halm00460
Cyanoamino acid metabolism
halm00630
Glyoxylate and dicarboxylate metabolism
halm00670
One carbon pool by folate
halm00680
Methane metabolism
halm01100
Metabolic pathways
halm01110
Biosynthesis of secondary metabolites
halm01120
Microbial metabolism in diverse environments
halm01200
Carbon metabolism
halm01230
Biosynthesis of amino acids
halm01240
Biosynthesis of cofactors
halm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FCF25_05510
09102 Energy metabolism
00680 Methane metabolism
FCF25_05510
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FCF25_05510
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FCF25_05510
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FCF25_05510
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FCF25_05510
Enzymes [BR:
halm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FCF25_05510
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF7620
Motif
Other DBs
NCBI-ProteinID:
QCJ46608
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Position
1088314..1089561
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AA seq
415 aa
AA seq
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MDYEHVREVDPAVADALSGEVTRQQETLAMIASENHVSRAVLEAQGSALTNKYAEGYPGS
RYYAGCEYADEVERLAIDRAKELWGAEHVNVQPHSGTQANMGVYLAMLEPGDKILSLELN
HGGHLSHGHPANFTGKLYDVEQYHVDAETGYIDYDALEEQAREFEPDIIVSGYSAYPRAV
EWERIQDVADDVGAYHLADIAHITGLVAAGVHPSPVGVADFVTGSTHKTIRAGRGGIIMT
SEEHAKAVDSAVFPGAQGGPLMHNIAGKAVGFHEAMQPEFEEYAERVVANAKTLAETFAE
NGLGVVSGGTDTHLVLVDLRESHPDLTGGEAEEALESVGVVLNANTVPGETRSAFNPSGI
RAGTPGLTTRGFDEEATAEVGDLIYRVVDNHDDDAVLEDVSASVRDLCEAHPLYE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggactacgagcacgtacgcgaggtcgacccggcggtcgcagacgccctctccggcgaa
gtgactcgccagcaggagacgctggcgatgattgcgagcgagaaccacgtcagtcgcgcc
gtgttggaggcacagggcagcgcgctgaccaacaagtacgccgagggctacccgggctct
cgctactacgccggctgcgagtacgccgacgaggtcgaacgcctcgccatcgaccgggcg
aaagagctgtggggcgcagagcacgtcaacgtccagccgcactcggggacgcaggcgaac
atgggcgtctacctcgccatgctcgaaccgggcgacaagattctctccttggaactgaac
cacggcggccacctgagccacggccacccggcgaacttcacggggaaactgtacgacgtc
gagcagtaccacgtcgacgccgagacgggttacatcgactacgacgcgctcgaagaacag
gcccgcgagttcgaaccggacatcatcgtctccgggtactccgcgtacccgcgtgcggtg
gagtgggagcgcatccaggacgtcgcagacgacgtgggcgcgtaccacctcgccgacatc
gcccacatcaccggcctcgtcgcggcgggcgtccacccctcgccggtcggcgtcgccgac
ttcgtcaccgggtcgacgcacaagaccatccgcgcgggtcgcggcggcatcatcatgacg
agcgaggagcacgcgaaagccgtcgactcggccgtcttccccggcgcgcagggcggcccg
ctcatgcacaacatcgcgggcaaagccgtcggcttccacgaggcgatgcagcccgagttc
gaggagtacgcggagcgcgtcgtcgccaacgcgaagacgctggcggagacgttcgcggag
aacgggctcggcgtcgtctccggcggcaccgacacccacctcgtgctcgtcgacctgcgc
gagtcgcaccccgacctcaccggcggcgaggccgaggaggcgctcgaatcggtcggcgtc
gtcctcaacgccaacacagtccccggcgagacgcgctcggcgttcaaccccagcggcatc
cgcgcgggcacgcccggactcacgacccgcggtttcgacgaggaggcgaccgccgaggtc
ggcgacctcatctaccgcgtcgtcgacaaccacgacgacgacgccgtgctcgaagacgtg
agcgcgagcgtcagggacctctgcgaggcgcacccgctgtacgagtaa
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