Haloprofundus sp. MHR1: FCF25_05640
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Entry
FCF25_05640 CDS
T05952
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halm03016
]
FCF25_05640
Enzymes [BR:
halm01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
FCF25_05640
Transfer RNA biogenesis [BR:
halm03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
FCF25_05640
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
QCJ46632
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Position
1115945..1117654
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AA seq
569 aa
AA seq
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MSTDSPDASEEEPEAFREACAELARRIVDGEIDRDDLESEKLSVCSEFSSPKVPKNAEIL
EHAPDEHRDDVKEVVRRKPVRTASGVSPVAIMTSPEMCPHGKCLYCPGGPASEFSSSQSY
TGHEPAAARGVQNDYDPYGQVTLRLEQLRHIGHPVDKVELILMGGTMTARSHDYQEWFVK
RALEAMNDYDLDEEPAPAEDQSFKPDPDEVEFRYLEDVIAENETGDIRNIGTTFETKPDW
CDPEQIDRMLDLGATKVEVGVQTTYERINREMHRGHGNQASIDANRRLRDAAFKVGFHMM
PGQPGMTREMCIEDFRQLFENPQWRPDYLKIYPTLVVRGTRIYDWWRRDDFDPLTNEEAA
DIVAEAMGKIPKYTRLQRVQRDIPADFIDAGVWKSNLRQLAEQRAEERGIELRDIRAREV
GMNEANPNPEDVELDVMTYEAGGGVEKFISFEDTEQDLLVGFCRLRFPSYSHAAPDGGAE
LSARDPVRRELEDAALVRELHVYGSEAGIGAEGEWQHKGYGKKLLREAEDIATDAGFEKI
SVISGIGVRQYYREKMGYHQDGPYVSKRL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacagccccgacgcctccgaagaggaacccgaagcgttccgcgaggcgtgt
gccgaactcgcccgacgcatcgtcgacggcgagatcgaccgcgacgacctcgaatccgag
aagctgagcgtctgctcggagttctcctcgccgaaggtgccgaagaacgccgagattctc
gaacacgcgcccgacgagcaccgcgacgacgtgaaggaggtcgtccgccggaaacccgtc
cggacggcgtcgggcgtctcgcctgtcgccatcatgacgtctcccgagatgtgcccgcac
gggaagtgtctgtactgccccggcgggccggcgtcggagttctcctcctcgcagagctac
acgggccacgaacccgccgccgcccgcggggtgcagaacgactacgacccgtacgggcag
gtgacgctccggctcgaacagctccggcacatcggccaccccgtcgacaaggtcgaactc
atcctgatgggcgggacgatgactgcgcggagccacgactaccaggagtggttcgtcaag
cgcgcgctggaggcgatgaacgactacgacctcgacgaagagccggcgcccgccgaggac
cagtcgttcaagcccgaccccgacgaggtcgagttccgctacctggaggacgtcatcgcc
gagaacgaaaccggagacatccggaacatcgggacgacgttcgagaccaaacccgactgg
tgcgaccccgagcagatagacagaatgctcgacttgggcgcgacgaaggtggaagtcggc
gtccagacgacgtacgagcgcatcaaccgcgagatgcaccgcggccacggcaatcaggcc
tccatcgacgccaatcgccgcctccgcgacgcggcgttcaaggtcggcttccacatgatg
cccggtcagccggggatgacccgcgagatgtgcatcgaggacttccgccagctgttcgag
aacccgcagtggcgacccgactacctcaaaatctacccgacgctcgtggtccgcgggacg
cgcatctacgactggtggcggcgcgacgacttcgacccgctgacgaacgaggaggccgcc
gacatcgtcgccgaggcgatggggaagattccgaagtacacgcgcctccagcgcgtccag
cgcgacatccccgcggacttcatcgacgccggggtctggaagtcgaatctgcgtcagttg
gccgaacagcgcgccgaagagcgaggaatcgaactccgcgacatccgcgcccgcgaggtg
gggatgaacgaggcgaaccccaacccggaggacgtggaactcgacgtgatgacgtacgaa
gccggcggcggcgtcgagaagttcatcagtttcgaggacaccgaacaggacttactcgtc
ggcttctgtcggctccgcttcccgtcgtactcgcacgccgcccccgacggcggcgcggaa
ctctccgcgcgcgacccggtgcgtcgcgaactcgaagacgcggcgctcgtccgcgaactc
cacgtctacgggagcgaggcgggcatcggtgcggagggcgaatggcagcacaagggctac
gggaagaagctgttgagagaggccgaggatatcgccacagacgccggattcgagaagatt
tcggtcatctccggcatcggcgtccggcagtactaccgcgagaagatgggctaccaccag
gacggaccgtacgtcagcaagcggctgtag
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