Haloprofundus sp. MHR1: FCF25_05850
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Entry
FCF25_05850 CDS
T05952
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
halm
Haloprofundus sp. MHR1
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halm03400
]
FCF25_05850
Enzymes [BR:
halm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FCF25_05850
DNA repair and recombination proteins [BR:
halm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FCF25_05850
Prokaryotic type
FCF25_05850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
QCJ46670
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Position
1158807..1160225
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AA seq
472 aa
AA seq
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MQLHWHRRDLRVSDNRALAAAADEAERRGEVVPVFAFDDLILEHAAAPRVRYMLDSLAEL
RERYRDRGSDLVAVRGDPSTLLVDLAEEFGAERVVWNDDYSGLAEERDGAVRAALSEAGV
EHESFCDQVHHEPGEIRTNAGDPYSVFTYFWKKWRDREKAEPYREPEASELASIAEDDEL
PTVDELGFGEPAAEVQTAGTDAARERLAAFCDDAIFRYAEDRDYPTREATSRLSADLKWG
TIGIREMYEATEAAKSAAEGDETESVEEFQSQLAWREFYAQVLYFNQRVVSENYKEYTNE
IEWRNDEEGLQAWKDGETGYPIVDAGMRQLREEAYMHNRLRMVVASFLTKDLLVDWREGY
DHFRELLADHDTGNDNGGWQWAASTGTDAQPYFRVFNPMTQGERYDPDAEYIKRYVPELA
DADAAAVHSWHELSADDREDAAPDYPAPIVDHDERREEAVAMFERARGETDE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcactggcaccgacgcgacctgcgggtgtcggacaaccgcgcgctcgcggcg
gcggccgacgaagccgagcgtcgcggcgaggtcgtccccgtgttcgccttcgacgacctg
attctcgaacacgccgccgcgccgagggtccggtacatgctcgactcgctcgcggagctt
cgggaacgataccgcgaccgcggcagcgacctcgtcgccgtccgcggcgacccctcgacg
ctgctcgtggacctcgccgaggagttcggagccgagcgagtcgtctggaacgacgactac
tccggactcgccgaggagcgcgacggggcggttcgggccgcgctctccgaggcgggagtc
gaacacgagtcgttctgcgaccaggtgcaccacgaacccggcgagattcggacgaacgcg
ggagacccctactcggtgttcacctacttctggaagaagtggcgcgaccgcgagaaggcg
gagccgtaccgcgaacccgaggcgtccgaactggcgtcgatagccgaagacgacgaactg
ccgaccgtcgacgagttgggcttcggagaacccgccgccgaggtccagaccgccggcacc
gacgccgcgcgcgagcgactcgcggcgttctgcgacgacgctatcttccggtacgccgag
gaccgcgactatccgacgcgggaggcgacctctcgcctgtcggcggacctcaagtggggg
accatcgggattcgggagatgtacgaagcgaccgaggcggcgaaatcggcggccgagggc
gacgaaaccgagtcggtcgaggagttccagtcgcagttggcgtggcgcgagttctacgcc
caagtcctctacttcaaccagcgcgtcgtctcggagaactacaaggagtacacgaacgaa
atcgagtggcgaaacgacgaggaggggttgcaggcgtggaaggacggcgagacgggctac
cccatcgtcgacgcggggatgcgccaactgcgggaggaggcgtacatgcacaaccgcctg
cggatggtcgtcgcctcgttcctgacgaaggacctcctcgtcgactggcgcgaggggtac
gaccacttccgcgaactgctcgccgaccacgacacgggcaacgacaacggggggtggcag
tgggcggcctcgacgggcaccgacgcccagccgtactttcgggtgttcaacccgatgacg
cagggtgagcgctacgaccccgacgccgagtacatcaagcggtacgtccccgaactggcg
gacgctgacgccgccgcggttcactcgtggcacgaactgtccgcggacgaccgggaggac
gccgctcccgactatccggcgcccatcgtcgaccacgacgaacggcgcgaggaagccgtc
gcgatgttcgagcgcgctcgcggcgagaccgacgagtag
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